DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A13 and CarT

DIOPT Version :9

Sequence 1:NP_004247.2 Gene:SLC22A13 / 9390 HGNCID:8494 Length:551 Species:Homo sapiens
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:550 Identity:154/550 - (28%)
Similarity:253/550 - (46%) Gaps:63/550 - (11%)


- Green bases have known domain annotations that are detailed below.


Human     7 VLAEIGDFGRFQIQLLILLCVLNFLSP--FYFFAHVFMVLDEP--HHCAVAWVKNHTFNLSAAEQ 67
            :|..||:||::|..|:..:| |....|  |..|..:||. |.|  :.|.:.    ...:|...::
  Fly    39 LLPTIGEFGKYQKLLVFGIC-LPACIPCGFCAFNQLFMA-DTPDDYWCRIP----ELLDLPLEQR 97

Human    68 LVLSVP--LDT--------------------AGHPEPCLMFRPPPANASLQDILSHRFNETQPCD 110
            ..||:|  ||.                    :|..:......|   |||...|         .|.
  Fly    98 KSLSIPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEP---NASWPLI---------KCP 150

Human   111 MGWEYPENRL-PSLKNEFNLVCDRKHLKDTTQSVFMAGL----LVGTLMFGPLCDRIGRKATILA 170
            .||||..:.: .|:..:|:||||    :|...::.:|.|    .||..:||.|.||.||:.:...
  Fly   151 QGWEYNTSVVWSSIVIDFDLVCD----QDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFV 211

Human   171 QLLLFTLIGLATAFVPSFELYMALRFAVATAVAGLSFSNVTLLTEWVGPSWRTQAVVLAQCNFSL 235
            .|.......|.|:....|..:...|..|...:..:......:..|.||.::|:...|:....::.
  Fly   212 CLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTS 276

Human   236 GQMVLAGLAYGFRNWRLLQITGTAPGLLLFFYFWALPESARWLLTRGRMDEAIQLIQKAASVNRR 300
            |.|:|:|:.|..|:|..|....:.|....|.|.:.:|||.||||.|||::||::::::.|.||.|
  Fly   277 GIMLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGR 341

Human   301 --------KLSPELMNQLVPEKTGPSGNA--LDLFRHPQLRKVTLIIFCVWFVDSLGYYGLSLQV 355
                    ||..::....:.::.....|.  .||.|.|.:|..|::|...||.:...|.|||...
  Fly   342 EFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYG 406

Human   356 GDFGLDVYLTQLIFGAVEVPARCSSIFMMQRFGRKWSQLGTLVLGGLMCIIIIFIPADLPVVVTM 420
            ...|.:.|::..:...||:|:.....:.|..:||:|....:::|||:.|:|.:.:|.|......:
  Fly   407 PALGTNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLV 471

Human   421 LAVVGKMATAAAFTISYVYSAELFPTILRQTGMGLVGIFSRIGGILTPLVILLGEYHAALPMLIY 485
            |.:|.|...:|:|.|.|.::.||:||.:|..|:|.......:|.|..|.:..||:.:..||::|.
  Fly   472 LYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIM 536

Human   486 GSLPIVAGLLCTLLPETHGQGLKDTLQDLE 515
            |.|.::.|:....||||....|..|:::.|
  Fly   537 GFLSMLGGMTGLRLPETLHHRLPQTIEEGE 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22A13NP_004247.2 2A0119 12..510 CDD:273328 150/538 (28%)
MFS 139..500 CDD:119392 106/374 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 511..551 0/4 (0%)
CarTNP_610052.1 2A0119 44..561 CDD:273328 150/538 (28%)
MFS 182..551 CDD:119392 106/368 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.920

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