DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB9A and Rab4

DIOPT Version :10

Sequence 1:NP_004242.1 Gene:RAB9A / 9367 HGNCID:9792 Length:201 Species:Homo sapiens
Sequence 2:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster


Alignment Length:169 Identity:66/169 - (39%)
Similarity:98/169 - (57%) Gaps:6/169 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRS 71
            |||.:::|..|.|||.|::.::.:||.....|||||||.::.:.|.|..|.:|||||||||||||
  Fly     8 LFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERFRS 72

Human    72 LRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISE-RQVST 135
            :...:|||:...||.:......||..|:||..:    |......:...:::|||.|:.| |.|:.
  Fly    73 VTRSYYRGAAGALLVYDATSRDSFNALTNWLND----ARTLASPNIVILLVGNKKDLEEARDVTF 133

Human   136 EEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLA 174
            .||..:.::| :..:.|||||...||..||.:..:.:||
  Fly   134 LEASTFAQEN-ELIFLETSAKTGENVEEAFLKCSKTILA 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB9ANP_004242.1 Rab9 3..172 CDD:206697 64/165 (39%)
Switch 1. /evidence=ECO:0000269|PubMed:34793709, ECO:0007744|PDB:7E1T 31..42 5/10 (50%)
Switch 2. /evidence=ECO:0000269|PubMed:34793709, ECO:0007744|PDB:7E1T 64..78 8/13 (62%)
Rab4NP_523777.1 Rab4 9..169 CDD:206696 63/164 (38%)

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