DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAB9A and Rab30

DIOPT Version :10

Sequence 1:NP_004242.1 Gene:RAB9A / 9367 HGNCID:9792 Length:201 Species:Homo sapiens
Sequence 2:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster


Alignment Length:208 Identity:67/208 - (32%)
Similarity:109/208 - (52%) Gaps:18/208 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRS 71
            |||::|:|:.||||:.|:.|:....|......||||:|:.|.:||:|..:.:|||||||||||||
  Fly     7 LFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQERFRS 71

Human    72 LRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTE 136
            :...:||.:...:|.:.:....:|..|.:|.:|...||:.|..:    :::|||.|..:|::.|:
  Fly    72 ITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLK----ILVGNKTDRDDREIPTQ 132

Human   137 EAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLIQTDTVNLHRKPKPS---- 197
            ..:.:.:.:..| :.|||||:|.||...|.|....::......|...........|:.:.|    
  Fly   133 IGEEFAKQHDMY-FLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGL 196

Human   198 ---------SSCC 201
                     |:||
  Fly   197 GSFSAKAAQSNCC 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB9ANP_004242.1 Rab9 3..172 CDD:206697 61/164 (37%)
Switch 1. /evidence=ECO:0000269|PubMed:34793709, ECO:0007744|PDB:7E1T 31..42 3/10 (30%)
Switch 2. /evidence=ECO:0000269|PubMed:34793709, ECO:0007744|PDB:7E1T 64..78 8/13 (62%)
Rab30NP_609094.1 Rab30 1..168 CDD:133314 61/165 (37%)

Return to query results.
Submit another query.