DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB9A and Rab5

DIOPT Version :10

Sequence 1:NP_004242.1 Gene:RAB9A / 9367 HGNCID:9792 Length:201 Species:Homo sapiens
Sequence 2:NP_523457.1 Gene:Rab5 / 33418 FlyBaseID:FBgn0014010 Length:219 Species:Drosophila melanogaster


Alignment Length:206 Identity:70/206 - (33%)
Similarity:110/206 - (53%) Gaps:21/206 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 68
            ||..||::|||:..||||||:.|:|..:|......|||..||.:.:.::...|..:|||||||||
  Fly    26 KSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQER 90

Human    69 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVIL---GNKIDISE 130
            :.||...:|||:...::.:.:.:..|||....|.||.       ..::.|.:::   |||.|:|.
  Fly    91 YHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKEL-------HKQASPNIVIALAGNKADLSN 148

Human   131 -RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDH----LIQTDTVNL 190
             |.|..:||:.:..:|| ..:.|||||...||...| .|:.:.|...|.:::    :..|.|   
  Fly   149 IRVVEFDEAKQYAEENG-LLFMETSAKTGMNVNDIF-LAIAKKLPKNDGANNQGTSIRPTGT--- 208

Human   191 HRKPKPSSSCC 201
             ...:|:::||
  Fly   209 -ETNRPTNNCC 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB9ANP_004242.1 Rab9 3..172 CDD:206697 63/171 (37%)
Switch 1. /evidence=ECO:0000269|PubMed:34793709, ECO:0007744|PDB:7E1T 31..42 3/10 (30%)
Switch 2. /evidence=ECO:0000269|PubMed:34793709, ECO:0007744|PDB:7E1T 64..78 7/13 (54%)
Rab5NP_523457.1 Rab5_related 29..191 CDD:206653 61/170 (36%)

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