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Protein Alignment LHX2 and B-H1

DIOPT Version :9

Sequence 1:	NP_004780.3	Gene:	LHX2 / 9355	HGNCID:	6594	Length:	406	Species:	Homo sapiens
Sequence 2:	NP_523387.1	Gene:	B-H1 / 32724	FlyBaseID:	FBgn0011758	Length:	544	Species:	Drosophila melanogaster

Alignment Length:	299	Identity:	75/299 - (25%)
Similarity:	119/299 - (39%)	Gaps:	75/299 - (25%)

- Green bases have known domain annotations that are detailed below.

Human   168 HFEALLQG------EYPA----HFNHADVAAAA---AAAAAAKSAGLGAAG--ANPLGLPYYNGV 217
            ||.....|      :|.|    |:..|..||||   ||||||.:|...|||  |.|:......||
  Fly   174 HFPPTAGGNGLNVAQYAAAMQQHYAAAAAAAAARNNAAAAAAAAAAAAAAGVAAPPVDGGVDGGV 238

Human   218 GTVQKGRPRKRKSPGPGADLAAYNAALSCNEN-DAEHLD---------RDQPYPS---------- 262
            |.          :|..|.||...:.....||: |:.::|         :|....|
  Fly   239 GL----------APPAGGDLDDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMS 293

Human   263 --SQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNL 325
              |:|.::.||:|..|||:|::..|........::.::||.|..|:...::.|:||.|.|::
  Fly   294 GLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWK--- 355

Human   326 LRQENTGVDKSTDAA-------LQTGTP-SGPASELSNASLSPSSTPTTLTDLTSPTLPTVTSVL 382
             ||...|::...:|.       |..|:| .|.....:.|..:..:||.|..|:.........::.
  Fly   356 -RQTAVGLELLAEAGNFAAFQRLYGGSPYLGAWPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQ 419

Human   383 TSVPGNLEGHEP----------------HSPSQTTLTNL 405
            ..:|.||....|                |..:.::|::|
  Fly   420 KPLPYNLYAGVPSVGVGVGVGVGPAPFSHLSASSSLSSL 458

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.