DRSC/TRiP Functional Genomics Resources

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Protein Alignment NHERF2 and nherf2

DIOPT Version :10

Sequence 1:XP_054170405.1 Gene:NHERF2 / 9351 HGNCID:11076 Length:360 Species:Homo sapiens
Sequence 2:NP_001135534.1 Gene:nherf2 / 100216077 XenbaseID:XB-GENE-481282 Length:348 Species:Xenopus tropicalis


Alignment Length:372 Identity:216/372 - (58%)
Similarity:271/372 - (72%) Gaps:39/372 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     3 APEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGE 67
            |.|..|||||.:.|||||||||||||||:.||:||:||||||||||.|:||||::||||.|||.|
 Frog     2 AQERHRPRLCHIKRGEQGYGFHLHGEKGKSGQYIRKVEPGSPAEAAGLKAGDRVLEVNGDNVEKE 66

Human    68 THHQVVQRIKAVEGQTRLLVVDQETDEELRRRQL-TCTEEMAQRGLPPAHDP--------WEPKP 123
            |||||||||||:|.:|||||||:||||.|::... :.||.......|....|        |:.|.
 Frog    67 THHQVVQRIKAIENETRLLVVDRETDEYLKKSPPGSPTESQPNSSAPSTPTPGSNNNGEVWKTKE 131

Human   124 DWAHT----GSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSP 184
            |.:|.    .:||:|.||:|::|.::|..||||:|:|||.||||||||:||||||:|||||||||
 Frog   132 DTSHEDQLHNNHSTENGKQDMNGQVKERCPRLCYLKKGPSGYGFNLHSEKSRPGQFIRSVDPGSP 196

Human   185 AARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLRVTPTEEHVE 249
            ||::|||.||||:||||||:|.::|:||||:||::::|.:|||:|.|||::||:|.:.|||.|.:
 Frog   197 AAKAGLRPQDRLVEVNGQNIENMKHSEVVANIKSKDNETKLLVIDQETDDYFKKLGIAPTEAHGK 261

Human   250 GPLPSPVTNGTSPAQLNG-GSACSSRSDLPGSDKDTEEGPPSGVWDQGSLQTPHPPCSPQDGSAW 313
            |.:  |:|||.:|.|||| .|..||.|||...|||:                       |.|...
 Frog   262 GTI--PLTNGVTPTQLNGDSSTSSSHSDLQSPDKDS-----------------------QAGDLI 301

Human   314 KQDPFQESGLHLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF 360
            ::|||:||||.||||||||||||:|.|.|||||||||::|.||||||
 Frog   302 RKDPFEESGLRLSPTAAEAKEKAKAKRANKRAPQMDWSKKHEIFSNF 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NHERF2XP_054170405.1 PDZ_NHERF-like 10..89 CDD:467249 62/78 (79%)
PDZ_NHERF-like 150..229 CDD:467249 57/78 (73%)
EBP50_C 232..360 CDD:462654 65/128 (51%)
nherf2NP_001135534.1 PDZ_NHERF-like 9..88 CDD:467249 62/78 (79%)
PDZ_NHERF-like 162..241 CDD:467249 57/78 (73%)
EBP50_C 244..348 CDD:462654 65/128 (51%)

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