DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNAP29 and snap29

DIOPT Version :10

Sequence 1:NP_004773.1 Gene:SNAP29 / 9342 HGNCID:11133 Length:258 Species:Homo sapiens
Sequence 2:NP_001243185.2 Gene:snap29 / 553460 ZFINID:ZDB-GENE-041111-226 Length:266 Species:Danio rerio


Alignment Length:275 Identity:140/275 - (50%)
Similarity:190/275 - (69%) Gaps:27/275 - (9%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSAYPKSYNPFDDDGEDEGARPAPWRDARDLPDGPD----APAD-RQQYLRQEVLRRAEATAAST 60
            |||||||:|||.||.|:|.:|.|| |...:..|.|:    :||: ||:.|:|||:|.|::...|:
Zfish     1 MSAYPKSHNPFADDDEEEDSRTAP-RRGFNFDDDPEESSLSPAERRQRQLQQEVMRTAQSAVDSS 64

Human    61 SRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFKS 125
            .|||.|:|||||||..::|||.||...|:|||:|:|.|:||::.||:|||:||||:||:|||||.
Zfish    65 HRSLGLIYESEKVGAETAEELIRQGEALKRTERMIDNMEQDMRTSQRHINTIKSVWGGMVNYFKG 129

Human   126 KPVETPPEQNGTLTSQP-----NNRLKEAISTSKEQEAKYQASHPNLRKLDDTDPVPRGAGSAMS 185
            ||....|.|.    .||     ::||:.|::.||:||.||||||||||||:.:     |.|::.:
Zfish   130 KPEPPKPAQK----DQPVCYEASSRLQTALAESKQQEDKYQASHPNLRKLETS-----GFGASAA 185

Human   186 TD-------AYPKNPHLRAYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDK 243
            .|       .:|||..|||.||::|.||||:|:||||||::.||:||||:|||..||.|..|.|.
Zfish   186 LDNGSSDQNGFPKNKQLRAAHQQLDRNLDEMSLGLGRLKNLGLGLQTEIDEQDISLDALLNKADT 250

Human   244 LDVNIKSTERKVRQL 258
            :|..|.||.|:::.|
Zfish   251 MDGKISSTNRQLKSL 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNAP29NP_004773.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 22/44 (50%)
SNARE_SNAP29N 47..111 CDD:277240 35/63 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..191 19/47 (40%)
SNARE_SNAP29C 199..257 CDD:277209 33/57 (58%)
snap29NP_001243185.2 None

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