DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNAP29 and snap29

DIOPT Version :10

Sequence 1:NP_004773.1 Gene:SNAP29 / 9342 HGNCID:11133 Length:258 Species:Homo sapiens
Sequence 2:NP_988988.1 Gene:snap29 / 394585 XenbaseID:XB-GENE-941286 Length:257 Species:Xenopus tropicalis


Alignment Length:260 Identity:142/260 - (54%)
Similarity:196/260 - (75%) Gaps:15/260 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     6 KSYNPFDDDGEDEGARPAPWRDARDLPDGP-----DAPADRQQYLRQEVLRRAEATAASTSRSLA 65
            :||||||:| ||:..:|..|.||.|..:.|     ...||:|:.|:|||.||||:...|::|||:
 Frog     3 RSYNPFDED-EDDDFKPVKWNDAADPYEDPVEKRKREAADKQRSLQQEVTRRAESMVDSSNRSLS 66

Human    66 LMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFKSKPVET 130
            |:|:|||:||.::|||.||...|:|||:|||||:||:|.||||||||||:|.|..|||:|||.||
 Frog    67 LVYDSEKIGVDTAEELVRQGEALKRTERMVDKMEQDMKTSQKHINSIKSMFSGFTNYFRSKPAET 131

Human   131 PPEQNGTLTSQPNNRLKEAISTSKEQEAKYQASHPNLRK---LDDTDPVPRGAGSAMSTDAYPKN 192
            ||| ||....:.:.:|:||:|:||.||.||||:||||.|   |:.::.:     .|.|:....||
 Frog   132 PPE-NGASEYKSSTKLEEALSSSKAQEDKYQATHPNLLKRETLESSNNM-----GASSSGYQHKN 190

Human   193 PHLRAYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQ 257
            ..||.||||:|||||::|:||||||::|||:||||::||::|.|||.||||:|:|||:|::::|:
 Frog   191 QVLRNYHQKVDSNLDDMSLGLGRLKNLALGLQTEIDDQDEMLGRLTGKVDKMDLNIKTTDKRIRE 255

Human   258  257
             Frog   256  255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNAP29NP_004773.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 16/39 (41%)
SNARE_SNAP29N 47..111 CDD:277240 40/63 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..191 17/43 (40%)
SNARE_SNAP29C 199..257 CDD:277209 37/57 (65%)
snap29NP_988988.1 SNARE_SNAP29N 48..112 CDD:277240 40/63 (63%)
SNARE_SNAP29C 197..254 CDD:277209 37/56 (66%)

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