DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNAP29 and Snap29

DIOPT Version :10

Sequence 1:NP_004773.1 Gene:SNAP29 / 9342 HGNCID:11133 Length:258 Species:Homo sapiens
Sequence 2:NP_446262.3 Gene:Snap29 / 116500 RGDID:620225 Length:257 Species:Rattus norvegicus


Alignment Length:260 Identity:218/260 - (83%)
Similarity:236/260 - (90%) Gaps:5/260 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSAYPKSYNPFDDDGEDEGARPAPWRDARDLPDGPDAPADRQQYLRQEVLRRAEATAASTSRSLA 65
            ||.|||||||||||.|||..|||||:||||||||||||.|||||||||||||||||||||||||:
  Rat     1 MSGYPKSYNPFDDDVEDEDTRPAPWKDARDLPDGPDAPIDRQQYLRQEVLRRAEATAASTSRSLS 65

Human    66 LMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFKSKPVET 130
            |||||||:||||||||.|||||||.|||||||||||||:||||||||||||||.:|||||||||.
  Rat    66 LMYESEKIGVASSEELVRQRGVLEHTEKMVDKMDQDLKMSQKHINSIKSVFGGFINYFKSKPVEP 130

Human   131 PPEQNGTLTSQPNNRLKEAISTSKEQEAKYQASHPNLRKLDDT--DPVPRGAGSAMSTDAYPKNP 193
            ||||||::..||::||||||:|||:||:||||||||||:|.|.  |.||   .|.::|:.||||.
  Rat   131 PPEQNGSIVPQPSSRLKEAINTSKDQESKYQASHPNLRRLHDAELDSVP---ASTVNTEVYPKNS 192

Human   194 HLRAYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQL 258
            .||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||:|||||
  Rat   193 SLRAYHQKIDSNLDELSVGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTEKKVRQL 257

Human   259  258
              Rat   258  257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNAP29NP_004773.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 33/39 (85%)
SNARE_SNAP29N 47..111 CDD:277240 58/63 (92%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..191 24/42 (57%)
SNARE_SNAP29C 199..257 CDD:277209 55/57 (96%)
Snap29NP_446262.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 34/40 (85%)
SNARE_SNAP29N 47..111 CDD:277240 58/63 (92%)
SNARE_SNAP29C 198..256 CDD:277209 55/57 (96%)

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