DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CD22 and Cd22

DIOPT Version :9

Sequence 1:NP_001762.2 Gene:CD22 / 933 HGNCID:1643 Length:847 Species:Homo sapiens
Sequence 2:XP_006539552.1 Gene:Cd22 / 12483 MGIID:88322 Length:879 Species:Mus musculus


Alignment Length:872 Identity:522/872 - (59%)
Similarity:637/872 - (73%) Gaps:31/872 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MHLLGPWLLLLVLEYLA---FSDSSKWVFEHPETLYAWEGACVWIPCTYRA--LDGDLESFILFH 60
            :|.|  | |||:|.::|   :|.::.|..:||:||:||||||:.|||.|:.  ....|::.:||.
Mouse    14 VHYL--W-LLLILGHVASARYSSANDWTVDHPQTLFAWEGACIRIPCKYKTPLPKARLDNILLFQ 75

Human    61 NPEYNKNTSKFDGTRLYESTKDGKVP------SEQKRVQFLGDKNKNCTLSIHPVHLNDSGQLGL 119
            |.|::|.|.||.||.||.:||..|.|      |:|.||.|||::..||||.|||:..||||.|||
Mouse    76 NYEFDKATKKFTGTVLYNATKTEKDPESELYLSKQGRVTFLGNRIDNCTLKIHPIRANDSGNLGL 140

Human   120 RMESKTEKWMERIHLNVSERPFPPHIQLPPEIQESQEVTLTCLLNFSCYGYPIQLQWLLEGVPMR 184
            ||.:.||:|||.|||||||:||.|:||:|.||:|||.|||||.|||||:||.|.|:|.||...:.
Mouse   141 RMTAGTERWMEPIHLNVSEKPFQPYIQMPSEIRESQSVTLTCGLNFSCFGYDILLKWFLEDSEIT 205

Human   185 QAAVTSTSLT------IKSVFTRSELKFSPQWSHHGKIVTCQLQDADGKFLSNDTVQLNVKHTPK 243
            ....:.||:|      ||:|:|.|:|.|.|:|:.|||.|.||:|.: .|.||..||:|:||:|||
Mouse   206 SITSSVTSITSSVTSSIKNVYTESKLTFQPKWTDHGKSVKCQVQHS-SKVLSERTVRLDVKYTPK 269

Human   244 LEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTT--VSWLKDGTSL------KKQNTFTLNLREVT 300
            |||||.|::  |.:.:||||||.|:||||:..|  |||.|||..|      ::|....|.|..||
Mouse   270 LEIKVNPTE--VEKNNSVTMTCRVNSSNPKLRTVAVSWFKDGRPLEDQELEQEQQMSKLILHSVT 332

Human   301 KDQSGKYCCQVSNDVGPGRSEEVFLQVQYAPEPSTVQILHSPAVEGSQVEFLCMSLANPLPTNYT 365
            ||..|||.||.|||:|||.||||.|.|.||||||.|.|..|||.||..||.:|.|||:|..||||
Mouse   333 KDMRGKYRCQASNDIGPGESEEVELTVHYAPEPSRVHIYPSPAEEGQSVELICESLASPSATNYT 397

Human   366 WYHNGKEMQGRTEEKVHIPKILPWHAGTYSCVAENILGTGQRGPGAELDVQYPPKKVTTVIQNPM 430
            ||||.|.:.|.|:||:.|||:.|||||.|||:|||.||.|:....|:|||.|.||.||||||:..
Mouse   398 WYHNRKPIPGDTQEKLRIPKVSPWHAGNYSCLAENRLGHGKIDQEAKLDVHYAPKAVTTVIQSFT 462

Human   431 PIREGDTVTLSCNYNSSNPSVTRYEWKPHGAWEEPSLGVLKIQNVGWDNTTIACAACNSWCSWAS 495
            ||.|||:|||.|.||||||.||.|.|.|.|:......|||:||.|.||:..::|||||..||||.
Mouse   463 PILEGDSVTLVCRYNSSNPDVTSYRWNPQGSGSVLKPGVLRIQKVTWDSMPVSCAACNHKCSWAL 527

Human   496 PVALNVQYAPRDVRVRKIKPLSEIHSGNSVSLQCDFSSSHPKEVQFFWEKNGRLLGKESQLNFDS 560
            ||.|||.||||||:|.|:.|.|||.:|..|.|||||:.|:|.||:|||:|||.|:.:...|:|.|
Mouse   528 PVILNVHYAPRDVKVLKVSPASEIRAGQRVLLQCDFAESNPAEVRFFWKKNGSLVQEGRYLSFGS 592

Human   561 ISPEDAGSYSCWVNNSIGQTASKAWTLEVLYAPRRLRVSMSPGDQVMEGKSATLTCESDANPPVS 625
            :||||:|:|:|.||||||:|.|:||.|:|||||||||||:||||.|||||.|||:||||||||:|
Mouse   593 VSPEDSGNYNCMVNNSIGETLSQAWNLQVLYAPRRLRVSISPGDHVMEGKKATLSCESDANPPIS 657

Human   626 HYTWFDWNNQSLPYHSQKLRLEPVKVQHSGAYWCQGTNSVGKGRSPLSTLTVYYSPETIGRRVAV 690
            .|||||.:.|.|....|||||||::|||:|:|.|:|||.:|.|.||.|||||||||||||:|||:
Mouse   658 QYTWFDSSGQDLHSSGQKLRLEPLEVQHTGSYRCKGTNGIGTGESPPSTLTVYYSPETIGKRVAL 722

Human   691 GLGSCLAILILAICGLKLQRRWKRTQSQQGLQENSSGQSFFVRNKKVRRAPLSEGPHSLGCYNPM 755
            |||.||.|.||||.|:|:|::||:.:||||||||||||||||||||.||.||||||.|.|||||.
Mouse   723 GLGFCLTICILAIWGMKIQKKWKQNRSQQGLQENSSGQSFFVRNKKARRTPLSEGPQSQGCYNPA 787

Human   756 MEDGISYTTLRFPEMNIPRTGDAESSEMQRPPPDCDDTVTYSALHKRQVGDYENVIPDFPEDEGI 820
            |:|.:||..|||||.:...||||.:...|.|||:..|:||||.:.||.:||||||.|..||||.|
Mouse   788 MDDTVSYAILRFPESDTHNTGDAGTPATQAPPPNNSDSVTYSVIQKRPMGDYENVNPSCPEDESI 852

Human   821 HYSELIQFGVGERPQAQENVDYVILKH 847
            |||||:|||.|:||||:|:||||.|||
Mouse   853 HYSELVQFGAGKRPQAKEDVDYVTLKH 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD22NP_001762.2 Ig 24..122 CDD:299845 54/105 (51%)
C2-set_2 143..228 CDD:285423 45/90 (50%)
I-set 242..327 CDD:254352 51/92 (55%)
IGc2 257..316 CDD:197706 34/66 (52%)
Ig_3 335..400 CDD:290638 39/64 (61%)
IG_like 343..415 CDD:214653 42/71 (59%)
IG_like 433..501 CDD:214653 39/67 (58%)
I-set 510..589 CDD:254352 45/78 (58%)
IGc2 521..578 CDD:197706 32/56 (57%)
IG_like 606..677 CDD:214653 47/70 (67%)
IGc2 608..666 CDD:197706 38/57 (67%)
ITIM motif 1 760..765 2/4 (50%)
ITIM motif 2 794..799 4/4 (100%)
ITIM motif 3 820..825 4/4 (100%)
ITIM motif 4 840..845 4/4 (100%)
Cd22XP_006539552.1 Ig 37..145 CDD:386229 55/107 (51%)
Ig 164..250 CDD:386229 44/85 (52%)
Ig_3 271..345 CDD:372822 37/75 (49%)
IGc2 377..435 CDD:197706 36/57 (63%)
IGc2 554..610 CDD:197706 32/55 (58%)
Ig_3 629..695 CDD:372822 45/65 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83967928
Domainoid 1 1.000 265 1.000 Domainoid score I18688
eggNOG 1 0.900 - - E1_KOG4475
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31052
Inparanoid 1 1.050 1037 1.000 Inparanoid score I5510
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG39623
OrthoDB 1 1.010 - - D250402at32523
OrthoFinder 1 1.000 - - FOG0011223
OrthoInspector 1 1.000 - - oto116887
orthoMCL 1 0.900 - - OOG6_113352
Panther 1 1.100 - - LDO PTHR46958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4603
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1818.270

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