Sequence 1: | XP_024308991.1 | Gene: | TRIP12 / 9320 | HGNCID: | 12306 | Length: | 2092 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
Alignment Length: | 2368 | Identity: | 538/2368 - (22%) |
---|---|---|---|
Similarity: | 856/2368 - (36%) | Gaps: | 727/2368 - (30%) |
- Green bases have known domain annotations that are detailed below.
Human 53 NSKAPKVQSNTTSELSRGHLSKRSCSSSSAVI---VPQPEDPDRAN--------TSERQKTGQVP 106
Human 107 KK-------------------DNSRGVKRSAS------PDYNRTNSPSSAKKPKALQHTESPSET 146
Human 147 NKPHSKSKKRHLDQE---QQLKSAQSPSTSKAHTRKSGATGGSRSQKRKRTESSCVKSGSGSEST 208
Human 209 GAEERSAKPTKLASKSATSAKAGC--STITDSSSAASTSSSSSAVASASSTVPPGARVKQGKDQN 271
Human 272 KARRSRSASSPSPRRSSREKEQSKTGGSSKFDWAARFSPKVSLPKTKLSLPGSSKSETSKP---- 332
Human 333 GPSGLQAKLASLRKSTKKRS----ESPPA--ELPSLRRSTR-QKTTGSCAST--SRRGSGLGKRG 388
Human 389 AA----------------------------EARRQEKMA---------DPESNQEAVNSSAARTD 416
Human 417 EAPQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALL--EARGLPPHL-------FG-PLG--- 468
Human 469 -PRMSQLFHRTIGSGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVK----- 527
Human 528 SVVPALITLLQMEHNFDIMNHACRALTYM----MEALPRSSAVVVD-----------------AI 571
Human 572 PVFLEKL----QVIQCID--------VAEQALTALEMLSRRHSKAI-------------LQAGG- 610
Human 611 ----LADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTC 671
Human 672 LCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQ 736
Human 737 LMKQNIAETLHFLLCGASNGSCQEQIDLVP-RSP--QELYELTSL--ICELMPCLPKEGIFAVDT 796
Human 797 MLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGEDEISLSTLGRVYTIDFNSMQQ 861
Human 862 INEDTGTARAIQRKPNPLAN--SNTSGYSESKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSS 924
Human 925 SAG-PAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDL-----KIVVGALQ--M 981
Human 982 AEILMQKLPD----------------------------------IFSVYFRREGVMHQVKHLAES 1012
Human 1013 ESLLTSPPKACTNGSGSMGSTTSVSSGTATAATHAAADLGSPSLQHSRDDSLDLSPQGRLSDVLK 1077
Human 1078 RKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTT--TQSPKSSFLASLNPKTWGRLSTQSNSNNIEP 1140
Human 1141 ARTAGGSG-LARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCAATE 1204
Human 1205 QLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREIRLKRFLHVF 1269
Human 1270 FSSPLPG--------------EEPIGRVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGN- 1319
Human 1320 --GTGGRGSQALKFFNTHQLKCQL---QRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYG 1379
Human 1380 RVREDDEDSDDDGSDEEIDESLVRYYIPTMYNVLYKVQGLWLKWLLLCFIQAAQFLNSGNVRHRL 1444
Human 1445 QFYIGEHLLPYNMTVYQAVRQFSIQAEDERESTDDESNPLGR-AGIWTKTHTIWYKPVR-EDEES 1507
Human 1508 NKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEVYLIPTPPENITFE--DPSL- 1569
Human 1570 ---DVILLLRVLHAISRYWYYLYDNAMCKE----IIPTSEFINSKLTAKANRQLQDPLVIMTGNI 1627
Human 1628 PTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAM-------------QRLLDTNPEINQSDSQD 1679
Human 1680 SRVAPRLDRKKRTVNR-EELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQ 1743
Human 1744 RADLGLW-----RGEEVTLSNPKGSQEGTK-----YIQNLQ-GLFALPFGRTAKPAHIAKVKMK- 1796
Human 1797 FRFLGKLMAKAIMDFRLVDLPLGLPFYKW------------------------------------ 1825
Human 1826 --MLRQETS--------LTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQD---KSQTKESLQYAL 1877
Human 1878 ETLTMNG--CSVEDLGLDFT-LP-----GFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGV 1934
Human 1935 SRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFL 1999
Human 2000 FEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK 2064
Human 2065 LPDYSSIEIMREKLLIAAREGQQSFHLS 2092 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
TRIP12 | XP_024308991.1 | SR-25 | 99..>233 | CDD:313680 | 30/163 (18%) |
Arm_3 | 489..>714 | CDD:330530 | 56/280 (20%) | ||
WWE | 808..874 | CDD:308464 | 5/65 (8%) | ||
HECTc | 1690..2090 | CDD:238033 | 156/469 (33%) | ||
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
ANK | 396..509 | CDD:238125 | |||
ANK repeat | 422..453 | CDD:293786 | |||
ANK repeat | 455..484 | CDD:293786 | |||
F5_F8_type_C | 1173..1298 | CDD:329041 | 29/134 (22%) | ||
MIB_HERC2 | 1333..1389 | CDD:310955 | 10/60 (17%) | ||
DamX | 1576..>1725 | CDD:330571 | 29/168 (17%) | ||
HECTc | 2265..2725 | CDD:238033 | 156/470 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D10145at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3704 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.850 |