DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KCNG4 and Sh

DIOPT Version :9

Sequence 1:NP_758857.1 Gene:KCNG4 / 93107 HGNCID:19697 Length:519 Species:Homo sapiens
Sequence 2:NP_001303569.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster


Alignment Length:549 Identity:156/549 - (28%)
Similarity:253/549 - (46%) Gaps:104/549 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    25 QLLSSPMETPSIKGLYYRRVRKVGALDA---------------SPV----DLKKEILINVGGRRY 70
            ||....::..|:.|  |..:.|:.:.|.               .|:    |..:.::|||.|.|:
  Fly    46 QLREQQLQRNSLDG--YGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRF 108

Human    71 LLPWSTLDRFPLSRLS----KLRLCRSYEEIVQLCDDYDEDSQEFFFDRSPSAFGVIVSFLAAGK 131
            .....||::||.:.|.    :||.             :|....|:|||||..:|..|:.:..:|.
  Fly   109 ETQLRTLNQFPDTLLGDPARRLRY-------------FDPLRNEYFFDRSRPSFDAILYYYQSGG 160

Human   132 LVLLQEMCALS-FQEELAYWGIEEAHLERCCLRKLLRKLEELEELAKLHREDVLRQQRETRRPAS 195
            .:.......|. |.||:.::.:.:         :.:.|..|.|...|           |..||..
  Fly   161 RLRRPVNVPLDVFSEEIKFYELGD---------QAINKFREDEGFIK-----------EEERPLP 205

Human   196 HSSRWGLCMNRLREMVENPQSGLPGKVFACLSILFVATTAVSLCVSTMPDL-------------R 247
            .:.:    ..::..:.|.|:|....:|.|.:|:..:..:.|..|:.|:|:.             :
  Fly   206 DNEK----QRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTK 266

Human   248 AEEDQGECSRKCYYIFIVETICVAWFSLEFCLRFVQAQDKCQFFQGPLNIIDILAISPYYVSLA- 311
            .|||  |........|::||:|:.||:.|..:||:...:|..|.:..:|:|||:||.||:::|| 
  Fly   267 IEED--EVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLAT 329

Human   312 -VSEEP-----PEDGERPSGSSYLEKVGL-VLRVLRALRILYVMRLARHSLGLQTLGLTVRRCTR 369
             |:||.     |:....|...|..:.:.| :|||:|.:|:..:.:|:|||.|||.||.|::...|
  Fly   330 VVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMR 394

Human   370 EFGLLLLFLAVAITLFSPLVYVAEKESGRVLEFTSIPASYWWAIISMTTVGYGDMVPRSVPGQMV 434
            |.|||:.||.:.:.|||..||.||..|.... |.|||..:|||:::|||||||||.|..|.|::|
  Fly   395 ELGLLIFFLFIGVVLFSSAVYFAEAGSDSSF-FKSIPDGFWWAVVTMTTVGYGDMRPVGVWGKIV 458

Human   435 ALSSILSGILIMAFPATSIFHTFSHSYLELKKEQEQLQARLRHLQNTGPASECELLDPHVASEH- 498
            .....::|:|.:|.|...|...|::.| ..:.:||::|:     ||....:.|..| |....:| 
  Fly   459 GSLCAIAGVLTIALPVPVIVSNFNYFY-HRETDQEEMQS-----QNFNHVTSCPYL-PGTLGQHM 516

Human   499 ---------ELMNDVNDLILEGPALPIMH 518
                     ..|.|::|.:...|.|...|
  Fly   517 KKSSLSESSSDMMDLDDGVESTPGLTETH 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNG4NP_758857.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 156/549 (28%)
BTB 61..161 CDD:197585 26/104 (25%)
BTB_2 61..160 CDD:280393 26/103 (25%)
Ion_trans 262..465 CDD:278921 85/210 (40%)
Ion_trans_2 377..459 CDD:285168 36/81 (44%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 418..423 4/4 (100%)
ShNP_001303569.1 BTB_2 99..187 CDD:280393 26/109 (24%)
BTB 99..182 CDD:197585 26/95 (27%)
Ion_trans 274..488 CDD:278921 85/215 (40%)
Ion_trans_2 403..479 CDD:285168 34/76 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000074
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.810

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