DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF235 and CG11247

DIOPT Version :9

Sequence 1:NP_004225.3 Gene:ZNF235 / 9310 HGNCID:12866 Length:738 Species:Homo sapiens
Sequence 2:NP_001097659.1 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:389 Identity:125/389 - (32%)
Similarity:185/389 - (47%) Gaps:56/389 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   292 ACSTHE---------KDTSYSSGIPVQQSVRTG----KKRYWCHECGKGFSQSSNLQTHQRVHTG 343
            ||...|         ||..|... .:::|.|.|    :|.:.|.:|.|.|...::||.|..:|:.
  Fly    54 ACVDEEEDDGGEQDSKDDDYVQP-QLKKSARKGEPVKRKHHVCSQCSKEFGGKTDLQRHMLIHSD 117

Human   344 EKPYTCHECGKSFNQSSHLYAHL-PIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEV 407
            |:|:.|.:||||:.|:.:|..|: ..|...|.:.|..|.|.|:....|.:|.|:|:|||||.|::
  Fly   118 ERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYPCDL 182

Human   408 CGKGFTQRSHLQAHERIH--TGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSL 470
            |.|.|.:...||.|...|  |..:.:.|..|...||.::||..|...|.:...::|..|...|:.
  Fly   183 CDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQFAN 247

Human   471 SFNLHSH-QRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQ 534
            ...|.:| .:.|.....::||.|.|.........:|.:.||..|...|.||...|:|.|.:..|.
  Fly   248 ELALRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYNVHM 312

Human   535 RVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPF 599
            |:||||:||:|.:|            ||.                |:.:|.|:.|...|||||||
  Fly   313 RMHTGERPYQCRIC------------HQT----------------FAHSSVLKLHIRKHTGEKPF 349

Human   600 KCDACQKR--FSQASHLQAH-QRVHTGEKPYKCDTCGKAFSQRSNLQVHQIIH------TGEKP 654
            :|..|:..  |||.:||:.| :::|..:|||.|:.|...|..:..||.| :.|      .|:||
  Fly   350 RCQLCEDEVAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVELQSH-VEHCAKCPVDGDKP 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF235NP_004225.3 KRAB A domain 6..47
KRAB 8..68 CDD:214630
KRAB 8..47 CDD:279668
KRAB B domain 48..80
C2H2 Zn finger 266..285 CDD:275368
COG5048 321..662 CDD:227381 115/347 (33%)
C2H2 Zn finger 321..341 CDD:275368 7/19 (37%)
zinc finger domain 321..341 7/19 (37%)
zf-H2C2_2 333..358 CDD:290200 11/24 (46%)
C2H2 Zn finger 349..369 CDD:275368 8/20 (40%)
zinc finger domain 349..369 8/20 (40%)
C2H2 Zn finger 377..397 CDD:275368 7/19 (37%)
zinc finger domain 377..397 7/19 (37%)
zf-H2C2_2 389..414 CDD:290200 13/24 (54%)
C2H2 Zn finger 405..425 CDD:275368 7/19 (37%)
zinc finger domain 405..425 7/19 (37%)
zf-H2C2_2 417..442 CDD:290200 8/26 (31%)
C2H2 Zn finger 433..453 CDD:275368 7/19 (37%)
zinc finger domain 433..453 7/19 (37%)
zf-H2C2_2 448..469 CDD:290200 4/20 (20%)
C2H2 Zn finger 461..481 CDD:275368 5/20 (25%)
zinc finger domain 461..481 5/20 (25%)
zf-H2C2_2 476..498 CDD:290200 6/22 (27%)
C2H2 Zn finger 489..509 CDD:275368 5/19 (26%)
zinc finger domain 489..509 5/19 (26%)
zf-H2C2_2 501..526 CDD:290200 8/24 (33%)
C2H2 Zn finger 517..537 CDD:275368 8/19 (42%)
zinc finger domain 517..537 8/19 (42%)
zf-H2C2_2 529..553 CDD:290200 10/23 (43%)
C2H2 Zn finger 545..565 CDD:275368 4/19 (21%)
zinc finger domain 545..565 4/19 (21%)
zf-H2C2_2 560..582 CDD:290200 3/21 (14%)
C2H2 Zn finger 573..593 CDD:275368 4/19 (21%)
zinc finger domain 573..593 4/19 (21%)
zf-H2C2_2 585..610 CDD:290200 12/26 (46%)
C2H2 Zn finger 601..621 CDD:275368 8/22 (36%)
zinc finger domain 601..621 8/22 (36%)
zf-H2C2_2 613..638 CDD:290200 10/25 (40%)
C2H2 Zn finger 629..649 CDD:275368 6/19 (32%)
zinc finger domain 629..649 6/19 (32%)
zf-H2C2_2 641..665 CDD:290200 7/20 (35%)
C2H2 Zn finger 657..677 CDD:275368
zinc finger domain 657..677
zf-H2C2_2 670..694 CDD:290200
C2H2 Zn finger 685..705 CDD:275368
zinc finger domain 685..705
C2H2 Zn finger 713..733 CDD:275368
zinc finger domain 713..733
CG11247NP_001097659.1 COG5048 <88..247 CDD:227381 54/158 (34%)
C2H2 Zn finger 95..115 CDD:275368 7/19 (37%)
zf-H2C2_2 107..132 CDD:290200 11/24 (46%)
C2H2 Zn finger 123..144 CDD:275368 8/20 (40%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
zf-H2C2_2 165..189 CDD:290200 13/23 (57%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 63/204 (31%)
C2H2 Zn finger 210..230 CDD:275370 7/19 (37%)
C2H2 Zn finger 238..260 CDD:275371 5/21 (24%)
C2H2 Zn finger 267..287 CDD:275368 5/19 (26%)
C2H2 Zn finger 295..315 CDD:275368 8/19 (42%)
zf-H2C2_2 309..332 CDD:290200 13/50 (26%)
C2H2 Zn finger 323..343 CDD:275368 8/47 (17%)
C2H2 Zn finger 351..374 CDD:275368 8/22 (36%)
C2H2 Zn finger 382..399 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

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