DRSC/TRiP Functional Genomics Resources

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Protein Alignment SOCS6 and Socs16D

DIOPT Version :9

Sequence 1:NP_004223.2 Gene:SOCS6 / 9306 HGNCID:16833 Length:535 Species:Homo sapiens
Sequence 2:NP_001259662.1 Gene:Socs16D / 32760 FlyBaseID:FBgn0030869 Length:1021 Species:Drosophila melanogaster


Alignment Length:583 Identity:146/583 - (25%)
Similarity:207/583 - (35%) Gaps:191/583 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    44 GSCYGKDMASCDINGEDEKGGKNR----------SKSESLMGTLKRRLSAKQKSKGKAGTPSG-- 96
            ||..|....:.|.:||..|.||.|          |:||.|..||.............||.|:.  
  Fly   517 GSGTGAGTETSDGDGEKSKHGKYRTPVGVGMGQVSESEPLHMTLDEVKQFYHTLYSDAGKPTPKP 581

Human    97 --SSADEDTFSSSSAPIVFKDVRAQRPIRSTSLRSHHYSPAPWPLRPTNSEETCIKMEVRVKALV 159
              .|::|..:|.|                                  ||:..|..:....|....
  Fly   582 MVKSSNETIWSVS----------------------------------TNTTTTTARTRSSVGTTR 612

Human   160 HSSSPSPALNGV-----------------------RKDFHDLQSETTCQEQANS----------L 191
            ....|..|.||.                       :::.|:|.::.......|:          .
  Fly   613 GGGGPPGAGNGAGGASSDGGVGGGSAGGGGGKYLSKQNKHNLDNDKLNNNNNNNNNHQPSQQQLE 677

Human   192 KSSASHNGDLHLHLDEHVPVVIGLMPQDYIQYTVPLDEGMYPL----EGSRSYCLDSSS------ 246
            |....|:.......::||     |..:...|:|:.|.:....:    ..:.|.|..|.:      
  Fly   678 KPPTEHHNQHQPPNNKHV-----LHSEKKSQFTLNLKQRFCSIFRFRRSNHSRCRGSGNNQTGTF 737

Human   247 ---------------PMEVSAVPPQVGGRAFPEDESQVDQDLVVAPEIFVDQSVNGLLIGTTGVM 296
                           |:.|....|...|      ::|:..:|            ||.||      
  Fly   738 ASANANAAATAPLIPPIAVITSAPGAAG------QTQLASEL------------NGTLI------ 778

Human   297 LQSPRAGHDDVPPL-------SPLLPPMQNNQIQRNFSGLTGTEAHVAESMRCHLNFDPNSA-PG 353
                 ....|.|..       |..|||:                              |..| |.
  Fly   779 -----TAEADEPNADLRKKFQSRALPPL------------------------------PKKALPF 808

Human   354 VARVY--DSVQSSGPMVVTS---------LTEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFL 407
            .|..|  ::|:|....|.|:         .|..::|:...||||||::...||..|::.|||||:
  Fly   809 TAAAYAIEAVKSEPEEVKTNAIQEPRALQFTSSIEKVKDYGWYWGPLSSEAAEKVLSSEPDGSFI 873

Human   408 VRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIRDSENGAFCY 472
            |||||||.|:.||||:.:....|.|||...|.|||......:..| |.:.||.::..|.:|.:.:
  Fly   874 VRDSSDDHYIFSLSFKLNNCVRHVRIEQDQGTFSFGSYAKFKSQT-ITEFIEKAVEHSRSGRYLF 937

Human   473 SRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVI-RQYTRIDLIQKLPLPNKMKDYLQEKH 534
            ...|.|......|:||||||||..|:|||::||||| :...|.||||.||||.::.|||..||
  Fly   938 FLHRRPEHGPMRVQLTNPVSRFKHVQSLQHMCRFVILKAVIRKDLIQTLPLPRRLLDYLNYKH 1000

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SOCS6NP_004223.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..105 5/28 (18%)
SH2_SOCS6 373..472 CDD:198250 42/98 (43%)
SOCS_SOCS6 495..535 CDD:239709 23/41 (56%)
Socs16DNP_001259662.1 SH2_SOCS7 839..937 CDD:198251 42/98 (43%)
SOCS_SOCS7 960..1009 CDD:239710 23/41 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I9166
eggNOG 1 0.900 - - E1_KOG4566
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10155
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3554
SonicParanoid 1 1.000 - - X1970
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.940

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