DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPR52 and CG13579

DIOPT Version :9

Sequence 1:NP_005675.3 Gene:GPR52 / 9293 HGNCID:4508 Length:361 Species:Homo sapiens
Sequence 2:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster


Alignment Length:476 Identity:104/476 - (21%)
Similarity:164/476 - (34%) Gaps:169/476 - (35%)


- Green bases have known domain annotations that are detailed below.


Human    12 LNMSSGIVNVS---ERHSC--PLGFGHYSVVDVCIFET---VVIVLLTFLIIAGNLTVIFVF--- 65
            :::.:|.:.|:   :..||  |...||..:..:.|.||   |:|::||..:|..|..||||.   
  Fly     1 MDLKTGSLLVAPAVKNSSCSHPRYSGHNFIAHIGIAETIEAVLILVLTLGVIGANCLVIFVINNR 65

Human    66 -HCAPLLHHYTTSYFIQTMAYADLFVGVSC----LVPTLSLLHYSTGVHESLTCQVFGYIISVLK 125
             :.|.:  |....|.:.::|..||.:|:..    |:|.|    :....:..:.||:...:...|.
  Fly    66 RYAAYI--HQQPRYLLTSLALNDLTIGLLITPFGLMPAL----FHCWPYGEIFCQIQALLRGALS 124

Human   126 SVSMACLACISVDRYLAITKPLSYNQLVTPCRLRICIILIWIYSCLIF----LPS--FFG----- 179
            ..|...|.|::||||:....|..|.|..:.......:.|.||.|..:|    ||.  :|.     
  Fly   125 QQSAVILVCMAVDRYMCALHPRRYYQHSSKKGCVAILSLTWIISLTVFGFLVLPKGYYFNNTGLM 189

Human   180 -----WGKPGYHGDIFEWCATSWLTSAYFTGFIVCLLYAPAAFVVCFTY---FHI--FKI----- 229
                 :.||.|.  |...||                ||.|...|:.:.|   ||:  |::     
  Fly   190 ACEPFYSKPSYR--ILSTCA----------------LYFPTTMVLMYCYGSSFHMSRFRLNDPTM 236

Human   230 --------------------CRQHTKEINDRRA-----------RFPSH---------------- 247
                                .:.|..:.:.::|           ..|||                
  Fly   237 PLTAAAHHPHPHPHPTAAQQLQMHQHQQHHQQAGMHSHLYHGHSHHPSHPSHPNHPNHHGHPHHH 301

Human   248 ----------------------------------EVDSSRETGHSPDRRYAMVLFRITSVFYMLW 278
                                              |.:||..|..|        :..|:..|.::.
  Fly   302 GPPVMGHLSMAMSMGLAGMPNMTNKITKKIVPIQEKNSSGSTSRS--------MAAISLGFIVMV 358

Human   279 LPYIIYFLLES---SRVLDNPTLSFLTTWLAISNSFCNCVIYSLSNSVFRLGLRRLSETMCTSCM 340
            .|:.|..::.:   |::  .|.|.||.||.|:|||..|..:|.|.||.||...|:|....|.   
  Fly   359 TPWTIQEIVTACTGSKL--PPFLDFLVTWTALSNSLWNPFMYWLLNSDFRRMSRQLMPNKCF--- 418

Human   341 CVKDQEAQEPKPRKRANSCSI 361
                  ..|..|..::..|.|
  Fly   419 ------PHEDTPEHKSGCCHI 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPR52NP_005675.3 7tm_classA_rhodopsin-like 43..321 CDD:410626 85/398 (21%)
TM helix 1 43..67 CDD:410626 12/30 (40%)
TM helix 2 77..99 CDD:410626 7/25 (28%)
TM helix 3 115..137 CDD:410626 5/21 (24%)
TM helix 4 160..176 CDD:410626 6/19 (32%)
TM helix 5 201..224 CDD:410626 5/25 (20%)
TM helix 6 264..286 CDD:410626 4/21 (19%)
TM helix 7 296..321 CDD:410626 13/24 (54%)
CG13579NP_001261169.1 7tm_4 51..>148 CDD:304433 27/102 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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