DRSC/TRiP Functional Genomics Resources

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Protein Alignment GPR50 and npr-33

DIOPT Version :10

Sequence 1:NP_004215.2 Gene:GPR50 / 9248 HGNCID:4506 Length:617 Species:Homo sapiens
Sequence 2:NP_510612.1 Gene:npr-33 / 185141 WormBaseID:WBGene00009278 Length:399 Species:Caenorhabditis elegans


Alignment Length:310 Identity:74/310 - (23%)
Similarity:137/310 - (44%) Gaps:35/310 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    10 PYGCIGCKLPQPEYPPALIIFMFCAMVITIVVDLIGNSMVILAVTKNKKLRNSG-NIFVVSLSVA 73
            |..|..|      :|....|......:|.|...:|||..::..:..::||.:|. |.|:::|::|
 Worm    47 PLQCFSC------HPKLYFIVFGLVFMIIICAGVIGNIFIVFVILMDRKLMSSSVNQFLLNLAIA 105

Human    74 DMLVAIYPYPLMLHAMSIGGWDLSQLQCQMVGFITGLSVVGSIFNIVAIAINRYCYICHSLQYER 138
            |:...|:..|..:..:...||.|....|.::.|:....:..|:...:||.:.|:..||..::.:|
 Worm   106 DLGNLIFCSPDAILVLIDRGWLLPNFACHLLRFLQEYFLYASVLLQMAIGVERFLAICSPMRMQR 170

Human   139 IFSVRNTCIYLVITWIMTVLAVLPN-MYIGTIEYDPRTYTCIFNYLNNPVFTVTIVC---IHFVL 199
             ||.:.|...|...|.:......|. :|.|.:.:  :.|.|.:..:::...|....|   :.:.:
 Worm   171 -FSTKTTISVLAGVWCVAACFASPYFLYQGIVFH--KLYFCFWKGISHKTRTYFKYCELIVLYAI 232

Human   200 PLLIVGFCYVRIWTKVLAARDPAGQNPDNQ-----------LAEVRNFLTMFVI-FLLFAVCWCP 252
            ||:.:...| .|..:||..      |.||.           |...|:.:.|.:| .||:.:|:.|
 Worm   233 PLVFLTTLY-SIMCRVLWG------NEDNHNIANHSQQEAILKLRRSVVKMLIISMLLYFLCYTP 290

Human   253 INVLTVLVAVSPKEMAGKIPNWLYLAAYFIAYFNSCLNAVIYGLLNENFR 302
            |.||.:|..:....:  ::|.||.|....::..:|..|.::|.:...:||
 Worm   291 IQVLFMLEKILDHSV--QLPQWLRLLLNVLSVMSSSTNPIVYIICCRHFR 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GPR50NP_004215.2 7tmA_Mel1 29..305 CDD:320337 70/291 (24%)
TM helix 1 30..56 CDD:320337 5/25 (20%)
TM helix 2 63..88 CDD:320337 7/25 (28%)
TM helix 3 101..131 CDD:320337 6/29 (21%)
TM helix 4 143..165 CDD:320337 4/22 (18%)
TM helix 5 185..214 CDD:320337 6/31 (19%)
TM helix 6 230..260 CDD:320337 11/30 (37%)
TM helix 7 273..298 CDD:320337 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..438
DUF4045 <379..>588 CDD:433066
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..596
npr-33NP_510612.1 7tm_classA_rhodopsin-like 62..334 CDD:410626 67/283 (24%)
TM helix 1 62..87 CDD:410626 5/24 (21%)
TM helix 2 94..121 CDD:410626 7/26 (27%)
TM helix 3 133..163 CDD:410626 6/29 (21%)
TM helix 4 175..194 CDD:410626 3/18 (17%)
TM helix 5 218..243 CDD:410626 5/25 (20%)
TM helix 6 268..298 CDD:410626 10/29 (34%)
TM helix 7 309..334 CDD:410626 6/24 (25%)
Blue background indicates that the domain is not in the aligned region.

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