DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCM2 and gcm2

DIOPT Version :10

Sequence 1:NP_004743.1 Gene:GCM2 / 9247 HGNCID:4198 Length:506 Species:Homo sapiens
Sequence 2:NP_001005603.1 Gene:gcm2 / 449615 ZFINID:ZDB-GENE-050127-1 Length:496 Species:Danio rerio


Alignment Length:505 Identity:251/505 - (49%)
Similarity:326/505 - (64%) Gaps:32/505 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    12 VCSYGMQLSWDINDPQMPQELALFDQFREWPDGYVRFIYSSDEKKAQRHLSGWAMRNTNNHNGHI 76
            |||:||:|:||||||::||:...:|.|:||.|||||:||||::|.|||||||||||||||||..|
Zfish    14 VCSFGMKLTWDINDPKLPQDTKQYDAFQEWTDGYVRYIYSSEDKNAQRHLSGWAMRNTNNHNCQI 78

Human    77 LKKSCLGVVVCTQACTLPDGSRLQLRPAICDKARLKQQKKACPNCHSALELIPCRGHSGYPVTNF 141
            |||||||||||::.|:|||||:||||||||||||.|||||.||||:|||||||||||||||||||
Zfish    79 LKKSCLGVVVCSRNCSLPDGSKLQLRPAICDKARQKQQKKLCPNCNSALELIPCRGHSGYPVTNF 143

Human   142 WRLDGNAIFFQAKGVHDHPRPESKSETEARRSAIKRQMASFYQPQKKRIRESEAEENQDSSGHFS 206
            ||:||.|||||||||||||||||||||||||||:||:|:|....||:|:.|.|.....|.:  |.
Zfish   144 WRVDGKAIFFQAKGVHDHPRPESKSETEARRSAVKRRMSSPPFSQKRRLVEPEPGRYHDMA--FP 206

Human   207 NIPPL--ENPEDFDIVTETSFPIPGQPCPSFPKSDVYKATCDL-ATFQGDKMPPFQKYSSPRIYL 268
            ||..|  |.||.|.|:.|::|||..|..|:|...:.||...|. |....|.....||.::.|:|:
Zfish   207 NIHQLTMEGPERFSIIAESNFPIQTQHYPTFQNPEPYKFPYDTHAAAMADAQSSLQKPANHRLYV 271

Human   269 PRPPCSYELANPGYTNSSPYP-TLYKDSTSIPNDTD----WVHLNTLQCNVNSYSSYERSF-DFT 327
            .||||.|:.|.|||..|.||| .||||.:|...:|:    ...|:.:....:...|:|||: :.:
Zfish   272 TRPPCGYDFAVPGYLGSGPYPAALYKDPSSPQMETEPNKSGSSLSGVSHGSSPLGSHERSYAESS 336

Human   328 NKQHGWKPALGKPSLVERTNHGQFQAMATRPYYNPELPCRYLTTPPPGAPALQTVITTTTKVSYQ 392
            .|.||||..|.|....:|.::.|....|...|||.:.||||.....|...||||:||||||||||
Zfish   337 GKHHGWKQILSKGGYGDRGDYSQLPTNANHHYYNSDYPCRYTGPAAPTPAALQTIITTTTKVSYQ 401

Human   393 -AYQPPAMKYSDSVREVKSLSSCNYAPEDTGMSVYPEPWGPPVTVTRAASPSGPPPMKIAGDCRA 456
             ..:|..:||.:::.:||.||:||        |:..||           ||:....:||..|...
Zfish   402 PCPKPSVVKYGENIYDVKGLSNCN--------SILEEP-----------SPNSYSDLKIPEDSGV 447

Human   457 IRPTVAIPHEPVSSRTDEAETWDVCLSGLGSAVSYSDRVGPFFTYNNEDF 506
            |:..::. .:.:.::.:.:|.::.......||.||.:|:...|.|::.::
Zfish   448 IKSALSY-QDTLPAKIERSENFEGYRYSSYSANSYPERMSHPFRYDSGEY 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCM2NP_004743.1 GCM 35..172 CDD:397602 116/136 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..213 34/59 (58%)
C-terminal conserved inhibitory domain (CCID). /evidence=ECO:0000269|PubMed:27745835 379..395 13/16 (81%)
gcm2NP_001005603.1 GCM 37..174 CDD:397602 116/136 (85%)

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