DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GCM2 and Gcm2

DIOPT Version :10

Sequence 1:NP_004743.1 Gene:GCM2 / 9247 HGNCID:4198 Length:506 Species:Homo sapiens
Sequence 2:NP_001099575.1 Gene:Gcm2 / 291047 RGDID:1311127 Length:504 Species:Rattus norvegicus


Alignment Length:506 Identity:345/506 - (68%)
Similarity:391/506 - (77%) Gaps:2/506 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPAAAVQEAVGVCSYGMQLSWDINDPQMPQELALFDQFREWPDGYVRFIYSSDEKKAQRHLSGWA 65
            |||.::|:...|.||||:|:|||||||||||.|.||.|||||||||||||||.||||||||||||
  Rat     1 MPADSMQDPDPVLSYGMKLTWDINDPQMPQEPAHFDHFREWPDGYVRFIYSSQEKKAQRHLSGWA 65

Human    66 MRNTNNHNGHILKKSCLGVVVCTQACTLPDGSRLQLRPAICDKARLKQQKKACPNCHSALELIPC 130
            ||||||||||||||||||||||.:||.|.|||.|||||||||||||||||||||||||||||:||
  Rat    66 MRNTNNHNGHILKKSCLGVVVCARACALKDGSHLQLRPAICDKARLKQQKKACPNCHSALELVPC 130

Human   131 RGHSGYPVTNFWRLDGNAIFFQAKGVHDHPRPESKSETEARRSAIKRQMASFYQPQKKRIRESEA 195
            |||||||||||||||||||||||||||||||||||||||.||||:||||||||||||:|..|.||
  Rat   131 RGHSGYPVTNFWRLDGNAIFFQAKGVHDHPRPESKSETEGRRSALKRQMASFYQPQKRRSEEPEA 195

Human   196 EENQDSSGHFSNIPPLENPEDFDIVTETSFPIPGQPCPSFPKSDVYKATCDLATFQGDKMPPFQK 260
            ...||:.||.::.|..|..|.|.:..:|||||.|....|||.|||::.||||.||.||.:.||||
  Rat   196 GSTQDTRGHSNSTPVPEPSELFAMPADTSFPISGHSSLSFPNSDVHRVTCDLPTFPGDVILPFQK 260

Human   261 YSSPRIYLPRPPCSYELANPGYTNSSPYPTLYKDSTSIPNDTDWVHLNTLQCNVNSYSSYERSFD 325
            ||:|.||.|.||.|||||:||.|.||||||||||.:.:|:|.||:|||:||.||:||.|||||.|
  Rat   261 YSNPSIYFPGPPWSYELASPGVTGSSPYPTLYKDPSIVPDDPDWIHLNSLQYNVSSYGSYERSLD 325

Human   326 FTNKQHGWKPALGKPSLVERTNHGQFQAMATRPYYNPELPCRYLTTPPPGAPALQTVITTTTKVS 390
            .|.:.|||||..||..|.|:.:....||:.|.||||.|||||||...|.|..|||||||||  |:
  Rat   326 LTARYHGWKPTHGKAGLEEKVDCRPCQAVPTSPYYNLELPCRYLPVAPAGTQALQTVITTT--VA 388

Human   391 YQAYQPPAMKYSDSVREVKSLSSCNYAPEDTGMSVYPEPWGPPVTVTRAASPSGPPPMKIAGDCR 455
            |||||.||:|:.|||:||.||:||.||.|:..|.:||:...|.....:||||||..|..:.|||:
  Rat   389 YQAYQHPALKHGDSVQEVSSLASCTYASENLPMPIYPQALDPQEGAIQAASPSGRAPGIVPGDCQ 453

Human   456 AIRPTVAIPHEPVSSRTDEAETWDVCLSGLGSAVSYSDRVGPFFTYNNEDF 506
            |.|||:|.|.|...|||..|:.|||||||:||.::|.||.|..|..:||||
  Rat   454 AARPTLAFPQETDPSRTAGADVWDVCLSGVGSVMAYLDRTGQPFNLDNEDF 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCM2NP_004743.1 GCM 35..172 CDD:397602 127/136 (93%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..213 40/57 (70%)
C-terminal conserved inhibitory domain (CCID). /evidence=ECO:0000269|PubMed:27745835 379..395 12/15 (80%)
Gcm2NP_001099575.1 GCM 35..172 CDD:397602 127/136 (93%)

Return to query results.
Submit another query.