DRSC/TRiP Functional Genomics Resources

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Protein Alignment MSC and CG33557

DIOPT Version :9

Sequence 1:NP_005089.2 Gene:MSC / 9242 HGNCID:7321 Length:206 Species:Homo sapiens
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:126 Identity:35/126 - (27%)
Similarity:51/126 - (40%) Gaps:42/126 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    39 ASPSDNSSAEEEDPDGEEERCALGTAGSAEGCKRKRPRVAGGGGAGGSAGGGGKKPLPAKGSAAE 103
            |...|:...:|.:|.|:|.          :|..|:||                            
  Fly    35 ADSEDSQIGQEANPGGQEN----------QGNHRRRP---------------------------- 61

Human   104 CKQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQ 164
                .|...|||||.|...::.|:..|:..:|..|.:.||||::.:|||||||.||...|:
  Fly    62 ----PRQKINARERYRTFNVNSAYEALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLE 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MSCNP_005089.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..115 12/75 (16%)
Nuclear localization signal. /evidence=ECO:0000255 71..76 2/4 (50%)
bHLH_TS_musculin 105..170 CDD:381546 25/60 (42%)
CG33557NP_001014730.1 HLH 67..119 CDD:197674 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149593
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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