DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAPN13 and sol

DIOPT Version :10

Sequence 1:NP_653176.2 Gene:CAPN13 / 92291 HGNCID:16663 Length:669 Species:Homo sapiens
Sequence 2:NP_476738.3 Gene:sol / 44014 FlyBaseID:FBgn0003464 Length:1594 Species:Drosophila melanogaster


Alignment Length:687 Identity:153/687 - (22%)
Similarity:257/687 - (37%) Gaps:168/687 - (24%)


- Green bases have known domain annotations that are detailed below.


Human     5 QEPSVETSIIKFKDQDFTT----LRDHCLSMGRTFKDETFPAADSSI----------GQKLLQEK 55
            ||..:..::.:.::.:..|    :..:|......|.|::||.|..|:          |..::|  
  Fly   981 QESKLMENLRQLEETEALTKWQNIIQYCRDNSELFVDDSFPPAPKSLYYNPASGAGEGNPVVQ-- 1043

Human    56 RLSNVIWKRPQDL--PGG--PPHFILDDISRFDIQQGGAADCWFLAALGSLTQNPQYRQKILMVQ 116
                  |:||.::  .||  ||..:.......||.||...:||.|:||..|.:.....:::|:.:
  Fly  1044 ------WRRPHEINCDGGAYPPWAVFRTPLPSDICQGVLGNCWLLSALAVLAEREDLVKEVLVTK 1102

Human   117 SFSHQYAGIFRFRFWQCGQWVEVVIDDRLPVQGDKCLFVRPRHQNQEFWPCLLEKAYAKLLGSYS 181
            ....|  |.::.|..:.|:|..|::||.||.. .:...|..:.:.::.|..|:|||.||:.|.|.
  Fly  1103 EICGQ--GAYQVRLCKDGKWTTVLVDDLLPCD-KRGHLVYSQAKRKQLWVPLIEKAVAKIHGCYE 1164

Human   182 DLHYGFLEDALVDLTGGVITNIHLHSSPV----------DLVKAVKTATKAGSLI---TCATPSG 233
            .|..|...:.|..|||....:|.|.:|.:          ||:.|...:::....:   :|...:.
  Fly  1165 ALVSGRAIEGLATLTGAPCESIPLQASSLPMPSEDELDKDLIWAQLLSSRCVRFLMGASCGGGNM 1229

Human   234 PTDTAQAMENGLVSLHAYTVTGAEQIQYRRGWEEIISLWNPWGWGEAEWRGRWSDGSQEWEETCD 298
            ..|..:..:.||...|||:|...:.||..|    ::.|.||  ||...|||.|||.|..|  |.|
  Fly  1230 KVDEEEYQQKGLRPRHAYSVLDVKDIQGHR----LLKLRNP--WGHYSWRGDWSDDSSLW--TDD 1286

Human   299 PRKSQLHKKREDGEFWMSCQDFQQKFIAMFICSEIPITLDHGNTLHEGWSQIMFRKQVILGNTAG 363
            .|.:.:.....:|.||:|.:|....|..:.||.           :..||:::.            
  Fly  1287 LRDALMPHGASEGVFWISFEDVLNYFDCIDICK-----------VRSGWNEVR------------ 1328

Human   364 GPRNDAQFNFSVQEPMEGTNVVVCVTVAVTPSNLKAEDAKFPLDFQVILAGSQRFREKFPPVFFS 428
                           ::||...:|....|..:.|:..:|:|.|                   |..
  Fly  1329 ---------------LQGTLQPLCSISCVLLTVLEPTEAEFTL-------------------FQE 1359

Human   429 SFRNTVQSSNNKFRRNFTMTYHLSPGNYVVVAQTRRKSAEFLLRI----------FL---KMPDS 480
            ..||:.:|..::.            ...||:.:||..:|..:.|:          |:   ||.:.
  Fly  1360 GQRNSEKSQRSQL------------DLCVVIFRTRSPAAPEIGRLVEHSKRQVRGFVGCHKMLER 1412

Human   481 DRHL--SSHFNLRMKGSPSEHGSQQSIFNRYAQQRLDIDATQLQGLLNQELLTGPPGDMFSLDEC 543
            |.:|  ...||....|....|...|.|...::.:||.::...             |......|..
  Fly  1413 DIYLLVCLAFNHWHTGIEDPHQYPQCILAIHSSKRLLVEQIS-------------PSPHLLADAI 1464

Human   544 RSLVALMELKVNGRLDQEEF--ARLWKRLV---------HYQHVFQKVQTSPGVLLSSDLWKAIE 597
            .||......:..||.....:  .:.|..||         .:.||....|.|..|:.:....|.::
  Fly  1465 ISLTLTKGQRHEGREGMTAYYLTKGWAGLVVMVENRHENKWIHVKCDCQESYNVVSTRGELKTVD 1529

Human   598 NTDFL-RGIFI---------SRELLHLVTLRYSDSVG 624
            :...| |.:.|         ...:.|.:|.|.::|.|
  Fly  1530 SVPPLQRQVIIVLTQLEGSGGFSIAHRLTHRLANSRG 1566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAPN13NP_653176.2 Peptidase_C2 35..331 CDD:459889 92/322 (29%)
Calpain_III 347..474 CDD:469636 19/136 (14%)
EFh_PEF_CAPN13_14 501..669 CDD:320070 27/145 (19%)
EF-hand motif 501..529 CDD:320070 4/27 (15%)
EF-hand motif 542..571 CDD:320070 5/30 (17%)
EF-hand motif 572..605 CDD:320070 8/33 (24%)
EF-hand motif 611..639 CDD:320070 5/14 (36%)
EF-hand motif 641..669 CDD:320070
solNP_476738.3 zf-RanBP 6..34 CDD:395516
RanBP2-type Zn finger 10..29 CDD:275376
zf-RanBP 135..164 CDD:395516
zf-RanBP 643..672 CDD:395516
RanBP2-type Zn finger 647..667 CDD:275375
zf-RanBP 704..731 CDD:395516
RanBP2-type Zn finger 708..727 CDD:275376
zf-RanBP 747..774 CDD:395516
RanBP2-type Zn finger 749..768 CDD:275376
zf-RanBP 927..954 CDD:395516
CysPc 1001..1328 CDD:128526 96/356 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.