DRSC/TRiP Functional Genomics Resources

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Protein Alignment VAPA and vapal

DIOPT Version :9

Sequence 1:NP_003565.4 Gene:VAPA / 9218 HGNCID:12648 Length:294 Species:Homo sapiens
Sequence 2:NP_001002546.1 Gene:vapal / 436819 ZFINID:ZDB-GENE-040718-281 Length:246 Species:Danio rerio


Alignment Length:291 Identity:178/291 - (61%)
Similarity:211/291 - (72%) Gaps:49/291 - (16%)


- Green bases have known domain annotations that are detailed below.


Human     8 MAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGS 72
            |:|.|||||||||.|||||||||||||.||||:|||:|||||||||||||||||||||||||||:
Zfish     1 MSKLEQILVLDPPNDLKFKGPFTDVVTANLKLKNPSERKVCFKVKTTAPRRYCVRPNSGIIDPGA 65

Human    73 TVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNEND 137
            |:|:||||||||||||||||||||||||||||..||.||:||:||||||||||||||||:|:|||
Zfish    66 TLTISVMLQPFDYDPNEKSKHKFMVQTIFAPPAVSDTEAMWKDAKPDELMDSKLRCVFELPSEND 130

Human   138 KLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQEKQKNDMEPSKAVP-LNASKQD 201
            |:                                             |:::.:..|| ||:||.|
Zfish   131 KV---------------------------------------------NEVDSACKVPVLNSSKAD 150

Human   202 GPMP-KPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKV-AHSDKPGSTSTAS 264
            |.:. ||.|.:.:|:|.|:::|:.||||.|:.||.:|||.|:|||||||:: ..:|...|.|:.|
Zfish   151 GLLSVKPLSGAHDDSEMRRILEDRKRLQTELSKLHDENRQLKDEGLRLRRLQPRTDHVSSNSSTS 215

Human   265 F-RDNVTSPLPSLLVVIAAIFIGFFLGKFIL 294
            . ||:|:..||||||||||||||||||||||
Zfish   216 VGRDSVSGSLPSLLVVIAAIFIGFFLGKFIL 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VAPANP_003565.4 Motile_Sperm 14..118 CDD:395510 91/103 (88%)
vapalNP_001002546.1 Motile_Sperm 7..111 CDD:279029 91/103 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194341284
Domainoid 1 1.000 196 1.000 Domainoid score I13190
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37824
Inparanoid 1 1.050 353 1.000 Inparanoid score I8648
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG40339
OrthoDB 1 1.010 - - D1332028at2759
OrthoFinder 1 1.000 - - FOG0000705
OrthoInspector 1 1.000 - - oto43660
orthoMCL 1 0.900 - - OOG6_101143
Panther 1 1.100 - - LDO PTHR10809
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X526
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 1 1.500 - -
1515.410

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