DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OSMR and sdk

DIOPT Version :9

Sequence 1:NP_001310435.1 Gene:OSMR / 9180 HGNCID:8507 Length:980 Species:Homo sapiens
Sequence 2:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster


Alignment Length:997 Identity:185/997 - (18%)
Similarity:302/997 - (30%) Gaps:383/997 - (38%)


- Green bases have known domain annotations that are detailed below.


Human   198 FNLNSVPFIRNKGTNIYCEAS--------QGNVSEGMKGIVLFVSKVLEEPKDFSCETEDFKTLH 254
            :|::....::..||..|...|        ..:|.:.::...|:..| :....|..|..|....:.
  Fly  1243 YNISYKQLVKTPGTIKYVPRSVVIEDHTANSHVLDSLEEWTLYEVK-MNACNDVGCSKESDTAVE 1306

Human   255 CT------WDP---------GTDTALGWSKQPSQ-------SYTLFESFSGEKKLCTHK---NWC 294
            .|      :.|         .|...:.|.:.|.|       .|.:|.:.:...:...||   |..
  Fly  1307 RTREAVPSYGPLDVQANATSSTTVVVQWGEVPRQHRNGQIDGYKVFYAAADRGQQVLHKTIPNNA 1371

Human   295 NWQITQDSQETY--------NFTLIAENYLRKRSVNI-LFNLTHRVYLMNPFSVNFENVNATNAI 350
            .:..|....:.|        .:|.:....|....:.: .|..|..|    |.:|:|.:|:.|.|.
  Fly  1372 TFTTTLTELKKYVVYHVQVLAYTRLGNGALSTPPIRVQTFEDTPGV----PSNVSFPDVSLTMAR 1432

Human   351 MTWKVHSIRNNFTYLCQIELHGEGKMMQQYNVSIKVNGEYFLS---ELEP------ATEYM---- 402
            :.|             .:.:...||:: .|.|:..:||...|:   |..|      |||.:    
  Fly  1433 IIW-------------DVPVDPNGKIL-AYQVTYTLNGSAMLNYSREFPPSDRTFRATELLPGKY 1483

Human   403 ------ARVRCADASHFWKWSE-WSGQNFTTLEAAPSEAPDVWRIVSLEPGNHTVTLFWKP---- 456
                  |:.|..       |.: .:...:||......:||.|.:|...:...|.:|..|.|    
  Fly  1484 YSFSCTAQTRLG-------WGKIATALVYTTNNRERPQAPSVPQISRSQIQAHQITFSWTPGRDG 1541

Human   457 ----------------------------LSKLHANG----------------------------- 464
                                        ||...|.|                             
  Fly  1542 FAPLRYYTVEMRENEGRWQPLPERVDPSLSSFTAVGLRPYMTYQFRIQATNDLGPSAFSRESVIV 1606

Human   465 --------------KIL--------------------------FYNVVVENL-DKPSS------S 482
                          |::                          .|.::.:.| |.|::      :
  Fly  1607 RTLPAAPAVGVGGLKVVPITTTSVRVQWSALETALWNGDASTGGYRILYQQLSDFPTALQSTPKT 1671

Human   483 ELHSIPAPANSTKLIL-----DRCSYQICVIANNSVG----ASPASVIVISADP--ENKEVEEER 536
            ::|.|    |...::|     || :|:|.|:..||.|    ..||:|.|..|.|  |.:.|:...
  Fly  1672 DVHGI----NENSVVLSDLQQDR-NYEIVVLPFNSQGPGPATPPAAVYVGEAVPTGEPRAVDAAP 1731

Human   537 IAGTEGGFSLSWKP-----QPGDVIGYVVDWCDHTQDVLGDFQWKNVGPNTTSTVISTDAFRPGV 596
            |:.||  ..|.|||     |.||::||.:.:.                     ...|..|..||.
  Fly  1732 ISSTE--VRLLWKPPKQSMQNGDILGYKIYYL---------------------VTYSPQALEPGR 1773

Human   597 RYDFRIYGLS---TKRIACLLEKKTGYSQEL----------------------APSDNPHVLVDT 636
            :::..|..:|   |......|:|.|.|..:|                      .||...|:....
  Fly  1774 KWEEEIEVVSATATSHSLVFLDKFTEYRIQLLAFNPAGDGPRSAPITVKTLPGVPSAPLHLRFSD 1838

Human   637 LTSHSFTLSWKDYSTESQPGFIQGYHV-YLKS-KARQCHPRFEKAVLSDGSECCKYKIDNPEEKA 699
            :|..|..::|      ..|.|:.|..: ||.: :..:.:.:|.|.|        |.|:.|   ..
  Fly  1839 ITMQSLEVTW------DPPKFLNGEILGYLVTYETTEENEKFSKQV--------KQKVSN---TT 1886

Human   700 LIVDNLKPESFYEFFITPFTSAGEGPSATFTKVTTPDEHSSMLIHILLPMVFCVLLIMVMCYLKS 764
            |.|.||:.|..|.|.:...||...||..:....|.|.:.|.:....|       :|...:..::.
  Fly  1887 LRVQNLEEEVTYTFTVRAQTSVDYGPGISENVTTGPQDGSPVAPRDL-------ILTKTLSSVEM 1944

Human   765 QWIKETCYPDIPDPYKSSILSLIKFKENPHLIIMNVSDCIPDAIEVVSKPEG--TKIQFLGTRKS 827
            .||..   |....|    ||..:                    ||...:.:.  |||:  .|||.
  Fly  1945 HWING---PSGRGP----ILGYL--------------------IEAKKRDDSRWTKIE--QTRKG 1980

Human   828 LTETELTKPNYLYLLPTEKNHSGPGPCICFENLTYNQ-------AASDS-----------GSCGH 874
            :.: :.|...::.:         |.....|..:.||:       .:.||           |...|
  Fly  1981 MMQ-DFTVSYHILM---------PSTAYTFRVIAYNRYGISFPVYSKDSILTPSKLHLEYGYLQH 2035

Human   875 VPVSPKAPSMLGLMTS---------------------PENVLKALEKNYMNSLGEIP-------- 910
            .|...:...|:.|..:                     .:...|.||::...|:.|..        
  Fly  2036 KPFYRQTWFMVSLAATSIVIIVMVIAVLCVKSKSYKYKQEAQKTLEESMAMSIDERQELALELYR 2100

Human   911 ----AGETSLNYVSQLASPMFG 928
                .|..:||.|..|.|...|
  Fly  2101 SRHGVGTGTLNSVGTLRSGTLG 2122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OSMRNP_001310435.1 FN3 233..>288 CDD:304408 12/76 (16%)
FN3 335..407 CDD:214495 20/90 (22%)
WSXWS motif 416..420 1/4 (25%)
FN3 446..522 CDD:238020 28/192 (15%)
fn3 540..608 CDD:278470 17/75 (23%)
FN3 626..734 CDD:238020 28/109 (26%)
Box 1 motif 771..779 1/7 (14%)
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653
Ig 378..447 CDD:143165
Ig 506..587 CDD:299845
IG_like 506..587 CDD:214653
I-set 592..682 CDD:254352
Ig 595..682 CDD:299845
FN3 686..789 CDD:238020
FN3 798..893 CDD:238020
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020 11/65 (17%)
fn3 1317..1402 CDD:278470 13/84 (15%)
FN3 1415..1507 CDD:238020 23/116 (20%)
FN3 1513..1608 CDD:238020 12/94 (13%)
fn3 1617..1708 CDD:278470 17/95 (18%)
FN3 1722..1823 CDD:238020 26/123 (21%)
FN3 1828..1920 CDD:238020 28/108 (26%)
FN3 1927..2016 CDD:238020 21/134 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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