DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NEK9 and gcn2

DIOPT Version :9

Sequence 1:NP_001316166.1 Gene:NEK9 / 91754 HGNCID:18591 Length:991 Species:Homo sapiens
Sequence 2:NP_595991.2 Gene:gcn2 / 2540500 PomBaseID:SPBC36B7.09 Length:1576 Species:Schizosaccharomyces pombe


Alignment Length:428 Identity:107/428 - (25%)
Similarity:171/428 - (39%) Gaps:150/428 - (35%)


- Green bases have known domain annotations that are detailed below.


Human    33 SASQGPRAGG-----------GAAEQEELHYIPIRVLGRGAFGEATLYRRTEDDSLVVWKEVDLT 86
            |.|..|..||           .:..:.|..:..:..||||.|||....:...|......|::.|.
pombe   526 SKSARPSYGGQQDGIIDLLYRKSVSRYETDFEELEFLGRGGFGEVVKVKNRIDGRFYAVKKLVLL 590

Human    87 RLSEKERRDALNEIVILALLQHDNIIAYYN----------------------------------- 116
            . .:||....|.|::.|:.|.|::::.||.                                   
pombe   591 S-DDKENSRILREVMTLSRLHHEHVVRYYTAWVETEANDTVTEIISSDSESLSQSLNMAVDFRQS 654

Human   117 -------------HFMD------------------------------------------------ 120
                         ||.|                                                
pombe   655 SSLPADKLSSLDIHFEDDYNSSADEEDPEASDISFQYSNTSDKEGSSDKDSSIEEASSVKTQENG 719

Human   121 -NTTLLIELEYCNGGNLYDKILRQKDKLFEEEMVVWYLF-QIVSAVSCIHKAGILHRDIKTLNIF 183
             |.||.|::|||...:|.|.|   :||:..:||  |.|| ||:.|::.||..|::|||:|..|||
pombe   720 LNATLYIQMEYCEKLSLQDII---RDKIPVDEM--WRLFRQILEALAYIHSRGMMHRDLKPGNIF 779

Human   184 LTKANLIKLGDYGLAKKLNSEY-----------SMAETL---VGTPYYMSPELC---QGVKYNFK 231
            |.:...:||||:|||.: |..|           |..|.|   |||..|::|||.   .||:|:.|
pombe   780 LDENRNVKLGDFGLATE-NENYQDNNDKWKNRQSADEDLTTGVGTALYVAPELLSRRNGVRYDAK 843

Human   232 SDIWAVGCVIFEL-LTLKRTFDATNPLNLCVKIVQGIRAMEVD------SSQYSLELIQMVHSCL 289
            .|::::|.::||: :|...:.:.       ::|:..||:..:.      .|:.|.| .:::|..|
pombe   844 VDMYSLGIILFEMCMTFSTSMER-------IRIIDTIRSPSISFPSTFPFSRASHE-FKVIHCLL 900

Human   290 DQDPEQRPTADELLDRPLLRKRRRE--MEEKVTLLNAP 325
            ..||.:||::.|||:...:..:..|  ::|.:.||:.|
pombe   901 QHDPTKRPSSQELLESEAIPPKVGEEFIQEGLRLLSNP 938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NEK9NP_001316166.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..43 5/20 (25%)
STKc_Nek9 51..308 CDD:270860 96/378 (25%)
S_TKc 52..308 CDD:214567 96/377 (25%)
RCC1 1 388..444
RCC1 389..441 CDD:278826
RCC1 444..495 CDD:278826
RCC1 2 445..498
RCC1 500..559 CDD:278826
RCC1 4 563..627
RCC1 5 628..680
RCC1 628..676 CDD:278826
RCC1 6 681..738
Interaction with NEK6. /evidence=ECO:0000269|PubMed:19001501 744..903
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 752..795
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 833..853
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 947..991
gcn2NP_595991.2 RWD 10..124 CDD:283440
PK_eIF2AK_GCN2_rpt1 241..508 CDD:270914
STKc_EIF2AK4_GCN2_rpt2 549..917 CDD:270948 97/382 (25%)
S_TKc 556..915 CDD:214567 95/373 (25%)
HisS 990..1417 CDD:223202
class_II_aaRS-like_core 990..1295 CDD:294192
HGTP_anticodon2 1326..1576 CDD:289514
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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