DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC6A5 and blot

DIOPT Version :9

Sequence 1:NP_004202.4 Gene:SLC6A5 / 9152 HGNCID:11051 Length:797 Species:Homo sapiens
Sequence 2:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster


Alignment Length:873 Identity:185/873 - (21%)
Similarity:310/873 - (35%) Gaps:274/873 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    52 PRSASTG-AQTFQSADARACEAERPGVGSCKLSSPRAQAASAALRDLREAQGAQASPP------- 108
            |||:... |:.|..|        |.|.|:...::|          ..|:..||.|:.|       
  Fly     7 PRSSDEALAEQFSLA--------RAGSGTKPPATP----------TYRQISGAMATLPRHDNNHN 53

Human   109 --PGSS---GPGNALHCKIPFLRG-PEGDAN----VSVGKGTLERNNTPVVGWVNMSQ------- 156
              ..||   ....|......::.| |.|..|    :||   ||:|.....:.|:||.:       
  Fly    54 HNDNSSRIRSDSTATSRTCVYIGGAPTGGGNGNEQISV---TLDRRQPQRMSWLNMRRAKANETD 115

Human   157 ------------------STVVLATDGITSVLPGSVAT--VATQEDEQGDENKARGNWS------ 195
                              |:||.:..|.|:...|.:::  :.|..|.....::.:|.:.      
  Fly   116 LPTVTPSPQTTRSCISTVSSVVDSGGGRTTATSGRISSSGIVTLSDSNNTLSEIQGGYHDMDHDA 180

Human   196 -SKLDFILSMVGYAV--------------------------GL----------GNVWRFPYLAFQ 223
             || :|.:|...:.:                          ||          .||.||| ....
  Fly   181 VSK-NFSISASAHNITTASNAKLLPAVEDESNKQTKCSVFRGLVLCLCLNLSYANVVRFP-RELD 243

Human   224 NGGGAFLIPYLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAIPALQGCGIAMLIISVLIAIYYN 288
            ..|.|:|:||:::|.|.|||:..||:|:|||..||....|:|.|..:|..:.....|.|.||:.:
  Fly   244 RYGSAYLVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKGACMISRFASWLSAIWVS 308

Human   289 VIICYTLFY--LFASFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVISDHPKIQIKNSTFCMTAY 351
            :.....|.|  :|||  :.||:..|..|         .||.|...:::.....:....||....:
  Fly   309 LQAVLALAYIGMFAS--NDLPFRECAGP---------VKLRLSGYLLTGTSGQECLQLTFLTPFW 362

Human   352 PNVTMVNFTSQANKTFVSGSEEYFKYFVLKISAGIEYPGEIRWPLALCLFLAWVIVYASL--AKG 414
            .|..                     ||.|               ||..|...|::|....  ||.
  Fly   363 RNPL---------------------YFGL---------------LAAGLIGLWIVVMLCTHNAKI 391

Human   415 IKTSGKVVYFTATFPYVVLVILLIRGVTLPGAGAGIW--------YFITPKW----EKLTDATVW 467
            ::.|      ...|..|.||:|    .||.|     |        ::....|    ..|.::.:|
  Fly   392 LRRS------IFVFGLVGLVLL----CTLTG-----WEVRNSFSRHYFPELWGFDSNLLAESNIW 441

Human   468 KDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGFMANERK 532
            .:|..|:.||::..:|.|..::....:..:..|.:::..|.|...:..|..:........:|   
  Fly   442 FNALMQVLFSVNCGFGALPMITGKFLYKGDAVRTSVVYLCFNLLINAIAVTLFMVQFDLSSN--- 503

Human   533 VNIENVADQGPGIAFVVYPEALT-----------RLPLSPFWAIIFFLMLLTLGLDTMFAT---- 582
             ..:|:.:..|..|  :|...|.           .|..|..:|:|....::::.:....:|    
  Fly   504 -GFQNMEELKPLTA--IYDRVLNGSREGDSHLLQHLVPSLIYALIILSAMVSITVAVYTSTRLVP 565

Human   583 ---------IETIVTSISDEFPKYLRTHKPVFTLGCCICFFIMGFPMITQGGIYMFQLVDTYAAS 638
                     |..:|..||...||:|                             :.:::|:....
  Fly   566 RRPNYVICLIGLVVAVISFAAPKFL-----------------------------IARVLDSRLVG 601

Human   639 YALVIIAIFELVGISYVYGLQRFCEDIEMMIGFQPNIF--WKVCWAFVTPTILTFIL---CFSFY 698
            ..:|...:|||:.|:::||.:....|:|..|| :| ||  |...|. :.|.|||.||   |....
  Fly   602 TMVVTALVFELIAITWIYGAKNIYTDLEFSIG-RP-IFRVWMWLWV-ICPAILTGILVWWCADDD 663

Human   699 QWEPMTYGSYRYPNWSMVLGWL----MLACSVIWIPIMFVIKMHLAPGRFIERLKLVCSPQPDWG 759
            |::.:  ..| .|.|:.:|..|    ::||..|:..:.:         .|...:.....|..:||
  Fly   664 QYDLL--AEY-LPRWAPILFVLAVIVIIACVQIFRQVEY---------NFFGMICEASKPAKEWG 716

Human   760 PF--LAQHRGERYKNMIDPLGTSSLGLK 785
            |.  ||:|..::::::....|.....|:
  Fly   717 PADPLARHSWKQWRSVCQDTGRRDFTLR 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A5NP_004202.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..118 17/78 (22%)
SLC6sbd_GlyT2 191..787 CDD:271389 147/689 (21%)
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 122/540 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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