DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC6A5 and CG43066

DIOPT Version :9

Sequence 1:NP_004202.4 Gene:SLC6A5 / 9152 HGNCID:11051 Length:797 Species:Homo sapiens
Sequence 2:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster


Alignment Length:636 Identity:235/636 - (36%)
Similarity:344/636 - (54%) Gaps:108/636 - (16%)


- Green bases have known domain annotations that are detailed below.


Human   163 TDGITSVLPGSVATVATQEDEQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFQNGGG 227
            |.|:|.||...........|..|:|.: |..||.|:.|.||::||:|||||:||||||..|||||
  Fly    28 THGVTIVLTAPQRNSVQSVDIPGNEPE-RAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGG 91

Human   228 AFLIPYLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAI-PALQGCGIAMLIISVLIAIYYNVII 291
            |||||:::||.|.|:|:|.:|:.:||....|.:.||..| |.|.|.||:..|:::.:|:||||||
  Fly    92 AFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVII 156

Human   292 CYTLFYLFASFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVISDHPKIQIKNSTFCMTAYPNVTM 356
            .:..||||.||...|||.||  |.|      .|...|:.|.                        
  Fly   157 TWVFFYLFNSFRYPLPWSSC--PLN------GTGFELEECA------------------------ 189

Human   357 VNFTSQANKTFVSGSEEYFKY-FVLKISAGIEYPGEIRWPLALCLFLAWVIVYASLAKGIKTSGK 420
                       .|....||.| ..|..:..::.||.::|.:.|||.|:|.||:..:.|||::|||
  Fly   190 -----------KSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGIQSSGK 243

Human   421 VVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSLSAAWGGL 485
            |||||:.|||:||.|..|||:||.|||||:.:..|||.|||.:.|||.|||||:|:|...|:|.|
  Fly   244 VVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSL 308

Human   486 ITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGF---------MANERKVNIENV--- 538
            |...|||...|||.||.|:|:..|:.|:|:|..|||:::||         :|:..::.::|.   
  Fly   309 IAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLG 373

Human   539 -----------------------------------ADQGPGIAFVVYPEALTRLPLSPFWAIIFF 568
                                               |.:|.|:||:|:.:|:..||.:||||::||
  Fly   374 LNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFF 438

Human   569 LMLLTLGLDTMFATIETIVTSISD-EFPKYLRTHKPVFTLGCCICFFIMGFPMITQGGIYMFQLV 632
            .|||:|||.:....:|.::.::.| :..|  |..|...|...|:..||:||...|..|.|..::.
  Fly   439 TMLLSLGLGSQIGILEGMLCTLFDIDIIK--RVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMF 501

Human   633 DTYAASYALVIIAIFELVGISYVYGLQRFCEDIEMMIGFQPNIFWKVCWAFVTPTILTFILCFS- 696
            |::|.:..||::|:.|::.:.::||.:||.|||..|.|::|..:|:..|.::.|.|:..||..| 
  Fly   502 DSFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSV 566

Human   697 -FYQWEPMTYGSYR----------YPNWSMVLGWLMLACSVIWIPIMFVIK 736
             |......|||::.          ||||.|.:...|:...|:.:||:|:::
  Fly   567 VFMVIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFLMR 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A5NP_004202.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..118
SLC6sbd_GlyT2 191..787 CDD:271389 227/608 (37%)
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 227/606 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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