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Protein Alignment SCARF2 and dsl-1
DIOPT Version :9
Sequence 1: | NP_699165.3 |
Gene: | SCARF2 / 91179 |
HGNCID: | 19869 |
Length: | 871 |
Species: | Homo sapiens |
Sequence 2: | NP_500054.1 |
Gene: | dsl-1 / 176939 |
WormBaseID: | WBGene00001103 |
Length: | 252 |
Species: | Caenorhabditis elegans |
Alignment Length: | 142 |
Identity: | 33/142 - (23%) |
Similarity: | 43/142 - (30%) |
Gaps: | 53/142 - (37%) |
- Green bases have known domain annotations that are detailed below.
Human 230 QCRERTFGARCDRYC-----QCFRGRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCR-RRCGQ 288
:|.....|..||.:| :....|| ..:||..|..|:.|..|..|.||. .|: :..|:
Worm 121 KCNRYWHGLHCDHFCNDDFARTINRRC-TQNGTLGCLEGFHGPNCELPVPAD----SCKCQNGGK 180
Human 289 CKGQQPCTVAEGRCLTCEPGWNGTKCDQPCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCNAG 353
|......|.|:...|.|| ||.||
Worm 181 CVSSLENTWAQNGSLICE---------------------------CRLGH--------------- 203
Human 354 WIGDRCETKCSN 365
:.|..||.|..|
Worm 204 FEGKHCEKKSFN 215
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1218 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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