DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment L3MBTL4 and L3mbtl4

DIOPT Version :10

Sequence 1:XP_011524059.1 Gene:L3MBTL4 / 91133 HGNCID:26677 Length:651 Species:Homo sapiens
Sequence 2:NP_001420345.1 Gene:L3mbtl4 / 103690158 RGDID:1587524 Length:613 Species:Rattus norvegicus


Alignment Length:569 Identity:447/569 - (78%)
Similarity:496/569 - (87%) Gaps:9/569 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MKQPNRKRKLNMDSKERLDQDGRLEQAEEEKKPKDSTTPLSHVPSAAAQGAWSWEWYLKEQKAVA 65
            |:||||||||:|.|.|.::||||:.|.|||.||.|..||.....|...|..||||.||:|..|||
  Rat     1 MRQPNRKRKLSMASTEHMNQDGRMGQTEEETKPGDGATPSGRESSVTTQETWSWEQYLREGNAVA 65

Human    66 APVELFSKDQSFPEHENGFQIGMRLEGIDPRHPSVFCVLSVAEVCGYRLRLHFDGYLSCYDFWTN 130
            ||||||||||||||||||||:||||||||.|.|||||||||||||||||||||||||||||||||
  Rat    66 APVELFSKDQSFPEHENGFQVGMRLEGIDARRPSVFCVLSVAEVCGYRLRLHFDGYLSCYDFWTN 130

Human   131 AGSPDIHPVGWCEKTKHELHIPKGYRKDKFVWMDYLKACKLQNAPKKLFRNRSPNGPMSKEFQVG 195
            ||||||||||||:|||||||||:.|||||||||||||||:|||||||||||||.|||:.||||||
  Rat   131 AGSPDIHPVGWCQKTKHELHIPRDYRKDKFVWMDYLKACRLQNAPKKLFRNRSSNGPVPKEFQVG 195

Human   196 MKLEAVDRKNPSLVCVATIADIVEDRLLVHFDNWDDSYDYWCDVNSPYVQPVGWCQENGRTLIAP 260
            ||:|||||:||.|:||||:|||||||:.||.|:||||:||||||:||.:|||||||||||.|:.|
  Rat   196 MKVEAVDRRNPCLMCVATVADIVEDRVRVHSDSWDDSFDYWCDVSSPCIQPVGWCQENGRNLVTP 260

Human   261 QGYPNPENFSWTEYLEATQTNAVPAKVFKMRLPHGFLPNMKLEVVDKRNPRLIRVATIVDVDDQR 325
            .|||.|:.|||.:||:|||..|||||.|..|.|||||||:|||.|||||||||||||:.||||.|
  Rat   261 PGYPGPDKFSWADYLQATQAKAVPAKAFNTRAPHGFLPNLKLEAVDKRNPRLIRVATVTDVDDYR 325

Human   326 VKVHFDGWDHKYDYWVEADSPDIHPIGWCDVTGHPLEVPQRTNDLKILPGQAVCPTPGCRGIGHI 390
            ||:||||||||||||::|||.||||||||||||||||||..:..:||||||..||||||||||||
  Rat   326 VKIHFDGWDHKYDYWMDADSQDIHPIGWCDVTGHPLEVPYGSEHVKILPGQPSCPTPGCRGIGHI 390

Human   391 RGPRYSGHHSAFGCPYSDMNLKKEATLHDRLREQTQANLESDSSHSKSKSLCSLNFNGKHEKVNS 455
            |||||:||||||||||||:|||:||.|.||||||||||||.|.|||||::||:||||||.|:|:|
  Rat   391 RGPRYAGHHSAFGCPYSDVNLKREAALQDRLREQTQANLEFDPSHSKSENLCNLNFNGKCEEVDS 455

Human   456 QPRLVQQAKCLKIKGKEDIDLDNLFRVLVLHPRGLEYSVEQAQQVLHQSVSMSTVSAHPFRDLPL 520
            :.|||||||||||||:||.|||||||         |||..|.||:|||.:||:::||||||||||
  Rat   456 ECRLVQQAKCLKIKGREDTDLDNLFR---------EYSASQVQQMLHQPLSMTSMSAHPFRDLPL 511

Human   521 GREQHCKLLPGVADIRASQVARWTVDEVAEFVQSLLGCEEHAKCFKKEE 569
            |||||||||||||||:||:|||||||||||||||||||||||||||||:
  Rat   512 GREQHCKLLPGVADIQASEVARWTVDEVAEFVQSLLGCEEHAKCFKKEQ 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L3MBTL4XP_011524059.1 MBT 79..179 CDD:459242 92/99 (93%)
MBT_L3MBTL4_rpt2 188..279 CDD:439126 65/90 (72%)
MBT 288..369 CDD:459242 65/80 (81%)
zf-C2HC 379..407 CDD:460240 26/27 (96%)
SAM_superfamily 540..>569 CDD:472832 28/28 (100%)
L3mbtl4NP_001420345.1 MBT 79..179 CDD:459242 92/99 (93%)
MBT 188..279 CDD:459242 65/90 (72%)
MBT 288..368 CDD:459242 65/79 (82%)
zf-C2HC 379..407 CDD:460240 26/27 (96%)
SAM_Scm-like-3MBT3,4 531..596 CDD:188981 29/30 (97%)

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