DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LATS1 and lats1

DIOPT Version :10

Sequence 1:XP_016866963.1 Gene:LATS1 / 9113 HGNCID:6514 Length:1163 Species:Homo sapiens
Sequence 2:NP_001018346.1 Gene:lats1 / 553164 ZFINID:ZDB-GENE-050523-2 Length:1068 Species:Danio rerio


Alignment Length:1183 Identity:717/1183 - (60%)
Similarity:843/1183 - (71%) Gaps:135/1183 - (11%)


- Green bases have known domain annotations that are detailed below.


Human     1 MKRSEKPEGYRQMRPKTFPASNYTVSSRQMLQEIRESLRNLSKPSDAAKAEHNMSKMSTEDPRQV 65
            |:|:||||||||||||||||||.:.:|:||||||||||||||..|:|:|.|.:..|...::.||.
Zfish     1 MRRAEKPEGYRQMRPKTFPASNNSGNSQQMLQEIRESLRNLSPSSNASKPEQSSGKGPPDESRQQ 65

Human    66 --RNPPKFGTHHKALQEIRNSLLPFANETNSS--RSTSEVNPQMLQDLQAAGFDEDMVIQALQKT 126
              ...|:...||:||||||.||.|||::::||  .|:::.:...|| .|..||||:::       
Zfish    66 GRSTNPRNSHHHRALQEIRKSLQPFAHDSSSSGDNSSADSSKHTLQ-TQEPGFDEELM------- 122

Human   127 NNRSIEAAIEFISKMSYQDPRREQMAAAAARPINASMK---PGNVQQSVNRKQSWKGSKESLVPQ 188
                       ::::::|:..|||:  .:|||:|.::|   |..:||.:.|:||||||||||.||
Zfish   123 -----------VNRINFQEAVREQI--PSARPVNTAIKQAGPPQIQQPLLRRQSWKGSKESLAPQ 174

Human   189 RHGPPLGESVAYHSESPNSQTDVGRPLSGSGISAFVQ--AHPSNGQRVNPPPPPQVRSVTPPPPP 251
            ||...:.:.:.|...||..|:|:.||      :.|.|  |..|:|||||.|...||||:      
Zfish   175 RHSALINDVLIYRPSSPGPQSDLSRP------ATFPQNLASASSGQRVNAPLSRQVRSI------ 227

Human   252 RGQTPPPRGTTPPPPSWEPNSQTKRYSGNMEYVISRISPVPPGAWQEGYPPPPLNTSPMNPPNQG 316
                      ||||.||:.|..|||||||::|::.||||||.|...:||         :||.:|.
Zfish   228 ----------TPPPSSWDSNPSTKRYSGNLDYLVPRISPVPQGPRGDGY---------INPQSQN 273

Human   317 QRGISSVPVGRQPIIMQ--SSSKFNFPSGRPGMQNGTGQTDFMIHQNVVPAGTVNRQPPPPYPLT 379
            |||:..|||||||||||  :|:|||||...|  |||:.|.::|    .:.:| ..:.|||||.:.
Zfish   274 QRGLRPVPVGRQPIIMQNSNSNKFNFPPSWP--QNGSMQNEYM----GMNSG-ARQPPPPPYSMH 331

Human   380 AANGQSPSALQTGGSAAPSSYTNGSIPQSMMVPNRNSHNMELYNISV--PGLQTNWPQSSSAPAQ 442
            ..|.|||:|.|...||..:.....|:||||:||||||||:::||:.|  |.:|    |:.:.|.|
Zfish   332 QTNRQSPTAQQMQSSALTAPPNGASLPQSMLVPNRNSHNLDMYNLGVIRPPVQ----QAQTPPGQ 392

Human   443 SSPSSGHEIPTWQPNIPVRSNSFNNPLGNRASHSANSQPSATTVTAITPAPIQQPVKSMRVLKPE 507
            .:.||      |..::|.|||||.:...|| ....|||.||||||.:|.|||.||||||||.|||
Zfish   393 DTSSS------WTHSVPGRSNSFTSAPNNR-RQCPNSQLSATTVTTVTQAPILQPVKSMRVQKPE 450

Human   508 LQTALAPTHPSWI-PQPIQTVQPSPFPEGTASNVTVMPPVAEAPNYQGPPPPYPKHLLHQNPSVP 571
            |.||:||.||.|: |.|....|..|.|..         |.||.|:|||||||||||||.|....|
Zfish   451 LHTAVAPAHPPWLQPPPPTAYQEPPTPPA---------PAAEVPSYQGPPPPYPKHLLQQQQPPP 506

Human   572 PYES--ISKPSKEDQPSLPKEDESEK--SYENVDSGDKEKKQITTSPITVRKNKKDEERR-ESRI 631
            .|:|  ..||..::..:...|::::.  |.|..:..::|||||||||:.||::|:||||: |||:
Zfish   507 GYDSSPALKPCSKEGDAADNENDTDSTCSSERAEGSEEEKKQITTSPVPVRRHKRDEERKGESRL 571

Human   632 QSYSPQAFKFFMEQHVENVLKSHQQRLHRKKQLENEMMRVGLSQDAQDQMRKMLCQKESNYIRLK 696
            ..||||||||||||||||:||:||||:.||||||:||.|||||.|||:|||.||.||||||||||
Zfish   572 PMYSPQAFKFFMEQHVENILKNHQQRMRRKKQLESEMQRVGLSGDAQEQMRMMLSQKESNYIRLK 636

Human   697 RAKMDKSMFVKIKTLGIGAFGEVCLARKVDTKALYATKTLRKKDVLLRNQVAHVKAERDILAEAD 761
            ||||||.||.|||||||||||||||||||||.||||.||||||||||||||||||||||||||||
Zfish   637 RAKMDKCMFEKIKTLGIGAFGEVCLARKVDTGALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD 701

Human   762 NEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPESLARFYIAELTCAVESVHKMGFIH 826
            |||||||||||||||||||||||||||||||||||||||.|.||:||||||.|||||||||||||
Zfish   702 NEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFQEDLAQFYIAELICAVESVHKMGFIH 766

Human   827 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHPRQDSMDFSNEWGDPSSCRCGDRL 891
            |||||||||||||||||||||||||||||||||||||||||.||||||||.||.|.::|||||||
Zfish   767 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSMEWEDSANCRCGDRL 831

Human   892 KPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILFEMLVGQPPFLAQTPL 956
            |||||||||||||||||||||||||||||||||||||||||||||||||:||:||||||||.|||
Zfish   832 KPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMVVGQPPFLATTPL 896

Human   957 ETQMKPGMVAHTCNPSALEGHSRKNTGTQEFEIGLGNIVINWQTSLHIPPQAKLSPEASDLIIKL 1021
            |||||                                 ||.||||||||.||||||||:|||:||
Zfish   897 ETQMK---------------------------------VIRWQTSLHIPLQAKLSPEATDLILKL 928

Human  1022 CRGPEDRLGKNGADEIKAHPFFKTIDFSSDLRQQ-SASYIPKITHPTDTSNFDPVDPDKLWSDDN 1085
            ||||:||||:||||||||.|||:|||.|.||||| .|.|||||||.||||||||||||||||:| 
Zfish   929 CRGPDDRLGRNGADEIKAQPFFRTIDLSKDLRQQHQAPYIPKITHSTDTSNFDPVDPDKLWSED- 992

Human  1086 EEENVNDTLNGWYKNGKHPEHAFYEFTFRRFFDDNGYPYNYPKPIEYEYINSQGSEQQSDEDDQN 1150
            .:.|.||||..|:|||||||||||||||||||||:|:||:.|||||.|  .....|...:||:.:
Zfish   993 ADGNHNDTLTRWFKNGKHPEHAFYEFTFRRFFDDSGHPYSCPKPIESE--EEDEDEDYVEEDEPS 1055

Human  1151 TGSEIKNRDLVYV 1163
            .....::||||||
Zfish  1056 QRPMEQSRDLVYV 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LATS1XP_016866963.1 UBA_LATS1 103..143 CDD:270580 7/39 (18%)
PRK10263 <448..>596 CDD:236669 70/152 (46%)
MobB_LATS1 629..704 CDD:439273 61/74 (82%)
Protein Kinases, catalytic domain 703..1117 CDD:473864 341/414 (82%)
lats1NP_001018346.1 PHA03247 <137..516 CDD:223021 201/436 (46%)
MobB_LATS1 569..644 CDD:439273 61/74 (82%)
Protein Kinases, catalytic domain 644..1024 CDD:473864 341/413 (83%)

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