DRSC/TRiP Functional Genomics Resources

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Protein Alignment ESAM and him-4

DIOPT Version :9

Sequence 1:NP_620411.2 Gene:ESAM / 90952 HGNCID:17474 Length:390 Species:Homo sapiens
Sequence 2:NP_001024582.1 Gene:him-4 / 181187 WormBaseID:WBGene00001863 Length:5198 Species:Caenorhabditis elegans


Alignment Length:373 Identity:80/373 - (21%)
Similarity:122/373 - (32%) Gaps:146/373 - (39%)


- Green bases have known domain annotations that are detailed below.


Human    87 YING------------------VTTSKPGVSLVYSMPSRNL-------SLRLEGLQEKDSGPYSC 126
            ||||                  .:.||.||.|   :||.||       .:::...:..|.|.|||
 Worm  4236 YINGSEGTETVIKCEIESESSEFSWSKNGVPL---LPSNNLIFSEDYKLIKILSTRLSDQGEYSC 4297

Human   127 SVNVQDKQGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLSCQ-SPRSKPAVQYQWDRQ 190
            :.      ....|::.:...|||.|.|.........|.|.|..|||.|: |...:||:.:..|.:
 Worm  4298 TA------ANKAGNATQKTNLNVGVAPKIMERPRTQVVHKGDQVTLWCEASGVPQPAITWYKDNE 4356

Human   191 LPSFQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTAQCNVTL-------------EVS 242
            |.: .|.........:.|:..:::|.|.||||.|||.|.|.:.:.::.|             .||
 Worm  4357 LLT-NTGVDETATTKKKSVIFSSISPSQAGVYTCKAENWVASTEEDIDLIVMIPPEVVPERMNVS 4420

Human   243 TGPGAAVVAGA---------------------------VVGTLVGL-GLLAGLVLLYH------- 272
            |.|...|....                           ::||.:.: .:|......||       
 Worm  4421 TNPRQTVFLSCNATGIPEPVISWMRDSNIAIQNNEKYQILGTTLAIRNVLPDDDGFYHCIAKSDA 4485

Human   273 --------------------------RRGKALEE-----------------PANDIKED----AI 290
                                      .:||..:.                 |..|:::.    :|
 Worm  4486 GQKIATRKLIVNKPSDRPAPIWVECDEKGKPKKTEYMIDRGDTPDDNPQLLPWKDVEDSSLNGSI 4550

Human   291 APRTLPWPKSSDTI-----------SKNGT--LSSVTSAR--ALRPPH 323
            |.|.:|.|:||.|:           .||.|  :.::...|  |..|||
 Worm  4551 AYRCMPGPRSSRTVLLHAAPQFIVKPKNTTAAIGAIVELRCSAAGPPH 4598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ESAMNP_620411.2 V-set 40..150 CDD:311561 21/87 (24%)
IG_like 166..241 CDD:214653 24/88 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..368 5/10 (50%)
him-4NP_001024582.1 IG_like 442..515 CDD:214653
IG 527..605 CDD:214652
Ig 628..694 CDD:319273
I-set 702..789 CDD:369462
I-set 793..881 CDD:369462
Ig 899..974 CDD:386229
I-set 1012..1081 CDD:369462
Ig 1109..1172 CDD:319273
Ig 1196..1263 CDD:319273
IG_like 1277..1358 CDD:214653
I-set 1373..1450 CDD:369462
Ig 1474..1544 CDD:386229
IGc2 1563..1628 CDD:197706
Ig 1651..1732 CDD:386229
Ig 1755..1818 CDD:319273
Ig 1839..1912 CDD:386229
Ig 1930..2002 CDD:386229
IG_like 2014..2095 CDD:214653
Ig 2094..2182 CDD:386229
Ig 2190..2283 CDD:386229
I-set 2296..2380 CDD:369462
Ig 2384..2471 CDD:386229
IGc2 2492..2556 CDD:197706
Ig 2580..2654 CDD:386229
Ig 2686..2753 CDD:319273
IG_like 2768..2850 CDD:214653
I-set 2854..2939 CDD:369462
IG_like 2951..3031 CDD:214653
I-set 3046..3116 CDD:369462
I-set 3127..3213 CDD:369462
Ig 3217..3292 CDD:386229
I-set 3300..3386 CDD:369462
I-set 3396..3472 CDD:369462
I-set 3481..3569 CDD:369462
I-set 3591..3663 CDD:369462
Ig 3667..3762 CDD:386229
Ig 3775..3848 CDD:386229
Ig 3859..3947 CDD:386229
IGc2 3968..4031 CDD:197706
Ig_3 4045..4119 CDD:372822
Ig_3 4136..4210 CDD:372822
Ig <4262..4314 CDD:386229 15/60 (25%)
Ig 4318..4406 CDD:386229 27/88 (31%)
IG_like 4418..4496 CDD:214653 10/77 (13%)
I-set 4570..4654 CDD:369462 8/29 (28%)
I-set 4752..4836 CDD:369462
EGF_CA 4996..5027 CDD:238011
EGF_CA 5034..5076 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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