DRSC/TRiP Functional Genomics Resources

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Protein Alignment ESAM and igcm-1

DIOPT Version :9

Sequence 1:NP_620411.2 Gene:ESAM / 90952 HGNCID:17474 Length:390 Species:Homo sapiens
Sequence 2:NP_508166.1 Gene:igcm-1 / 180433 WormBaseID:WBGene00018215 Length:1073 Species:Caenorhabditis elegans


Alignment Length:210 Identity:45/210 - (21%)
Similarity:85/210 - (40%) Gaps:46/210 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    26 PSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGEVSSSQPWEVPFVMWFFKQKEKEDQVLSYING 90
            ||.:.::......:..:|.|.......|...:..::||..:...|       ::...:.|.:.. 
 Worm   152 PSESVIEGDFMTAKCVSVGGSPQPTFTWTLPNDTIASSAIFTTQF-------RDGATESLLHFR- 208

Human    91 VTTSKPGVSLVYSMPSRNLSLRLEGLQEKDSGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPPAP 155
            ||:|..|.|:...:.:|.:   |.|               :.||       :|:.:||||..|..
 Worm   209 VTSSDDGKSVQCDVTNRAM---LGG---------------ETKQ-------VKSSQLNVLYKPVV 248

Human   156 PSCRLQGVPHV----GANVTLSCQSPRSKPAVQYQWDRQLPSFQTFFAPALDVIRGSLSLTNLSS 216
            .....:.:.|:    |..|.|:|.|..:.||..|:| :.:.|.:.:        :|.:....:.|
 Worm   249 FVTPTENLTHLSVEEGELVNLTCNSASNPPAHSYEW-KHIASGERY--------QGKIWPIRVDS 304

Human   217 SMAGVYVCKAHNEVG 231
            ||:|.:.|::.||:|
 Worm   305 SMSGDFECRSTNELG 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ESAMNP_620411.2 V-set 40..150 CDD:311561 20/109 (18%)
IG_like 166..241 CDD:214653 19/70 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..368
igcm-1NP_508166.1 Ig 45..119 CDD:299845
Ig 146..226 CDD:299845 14/81 (17%)
Ig_3 245..316 CDD:290638 18/79 (23%)
IG_like 258..329 CDD:214653 20/71 (28%)
IG_like 338..398 CDD:214653
IGc2 347..398 CDD:197706
Ig_2 429..513 CDD:290606
IG_like 437..513 CDD:214653
Ig 537..615 CDD:143165
IG_like 644..728 CDD:214653
IGc2 646..719 CDD:197706
FN3 733..843 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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