DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBX19 and tbxt

DIOPT Version :9

Sequence 1:NP_005140.1 Gene:TBX19 / 9095 HGNCID:11596 Length:448 Species:Homo sapiens
Sequence 2:NP_001008139.1 Gene:tbxt / 493501 XenbaseID:XB-GENE-478789 Length:434 Species:Xenopus tropicalis


Alignment Length:423 Identity:247/423 - (58%)
Similarity:297/423 - (70%) Gaps:22/423 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    16 VSHLLNVVESELQAGREKGDPTEKQLQIILEDAPLWQRFKEVTNEMIVTKNGRRMFPVLKISVTG 80
            |.|||:.||:|||||.||||||||:|::.||:..||.||||:||||||||||||||||||:||:|
 Frog    17 VDHLLSAVENELQAGSEKGDPTEKELKVSLEERDLWMRFKELTNEMIVTKNGRRMFPVLKVSVSG 81

Human    81 LDPNAMYSLLLDFVPTDSHRWKYVNGEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKAPISFSKV 145
            |||||||:.|||||..|:||||||||||||.||||..:.||||||||||||||||||.|:|||||
 Frog    82 LDPNAMYTFLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKDPVSFSKV 146

Human   146 KLTNKLNGGGQIMLNSLHKYEPQVHIVRVGSAHRMVTNCSFPETQFIAVTAYQNEEITALKIKYN 210
            |||||:||||||||||||||||::||||||...||:|:.||||||||||||||||||||||||:|
 Frog   147 KLTNKMNGGGQIMLNSLHKYEPRIHIVRVGGTQRMITSHSFPETQFIAVTAYQNEEITALKIKHN 211

Human   211 PFAKAFLDAKERNHLRDVPEAISESQHVTYSHLGGWIFSNPDGVCTAGNSNYQYAAPLPLPAPHT 275
            |||||||||||||..:|:.:...:|||..:|.||.|:..|...:|:. |.:.|:.||:.|.:|  
 Frog   212 PFAKAFLDAKERNDYKDILDEGIDSQHSNFSQLGTWLIPNGGSLCSP-NPHTQFGAPISLSSP-- 273

Human   276 HHGCEHYSGLRGHRQAPYPSAYMHRNHSPSVNLIESSSNNLQVFSGPDSWTSLSSTPHASILSVP 340
             ||||.||.||.||.|||||.|:|||:||: ||.::||..|.:....|:|::|....|..:|.:.
 Frog   274 -HGCERYSSLRNHRSAPYPSPYVHRNNSPN-NLADNSSACLSMLQSHDNWSTLQMPAHTGMLPMS 336

Human   341 HTNGPINPGPSPYPCLWTISNGAGGPSGPGPEVHASTPGAFLLGNPAVTSPPSVLSTQAPTSA-G 404
            |:.| ..|..|.||.||::||....|......:.......:|.|:   |...|.||...|:.| |
 Frog   337 HSAG-TPPTSSQYPSLWSVSNSTLTPVSQSGGITNGISSQYLRGS---TPHYSSLSHAVPSPATG 397

Human   405 VEVLGEPSLTSIA------------VSTWTAVA 425
            ..:....|.|.||            .||||.||
 Frog   398 SPLYEHGSQTEIAENQYDVTAHSRLSSTWTTVA 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBX19NP_005140.1 T-box 43..218 CDD:307177 143/174 (82%)
tbxtNP_001008139.1 T-box 44..219 CDD:307177 143/174 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 1 1.000 - - FOG0002920
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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