DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBX19 and tbxt

DIOPT Version :10

Sequence 1:NP_005140.1 Gene:TBX19 / 9095 HGNCID:11596 Length:448 Species:Homo sapiens
Sequence 2:NP_001008139.1 Gene:tbxt / 493501 XenbaseID:XB-GENE-478789 Length:434 Species:Xenopus tropicalis


Alignment Length:423 Identity:247/423 - (58%)
Similarity:297/423 - (70%) Gaps:22/423 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    16 VSHLLNVVESELQAGREKGDPTEKQLQIILEDAPLWQRFKEVTNEMIVTKNGRRMFPVLKISVTG 80
            |.|||:.||:|||||.||||||||:|::.||:..||.||||:||||||||||||||||||:||:|
 Frog    17 VDHLLSAVENELQAGSEKGDPTEKELKVSLEERDLWMRFKELTNEMIVTKNGRRMFPVLKVSVSG 81

Human    81 LDPNAMYSLLLDFVPTDSHRWKYVNGEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKAPISFSKV 145
            |||||||:.|||||..|:||||||||||||.||||..:.||||||||||||||||||.|:|||||
 Frog    82 LDPNAMYTFLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKDPVSFSKV 146

Human   146 KLTNKLNGGGQIMLNSLHKYEPQVHIVRVGSAHRMVTNCSFPETQFIAVTAYQNEEITALKIKYN 210
            |||||:||||||||||||||||::||||||...||:|:.||||||||||||||||||||||||:|
 Frog   147 KLTNKMNGGGQIMLNSLHKYEPRIHIVRVGGTQRMITSHSFPETQFIAVTAYQNEEITALKIKHN 211

Human   211 PFAKAFLDAKERNHLRDVPEAISESQHVTYSHLGGWIFSNPDGVCTAGNSNYQYAAPLPLPAPHT 275
            |||||||||||||..:|:.:...:|||..:|.||.|:..|...:|:. |.:.|:.||:.|.:|  
 Frog   212 PFAKAFLDAKERNDYKDILDEGIDSQHSNFSQLGTWLIPNGGSLCSP-NPHTQFGAPISLSSP-- 273

Human   276 HHGCEHYSGLRGHRQAPYPSAYMHRNHSPSVNLIESSSNNLQVFSGPDSWTSLSSTPHASILSVP 340
             ||||.||.||.||.|||||.|:|||:||: ||.::||..|.:....|:|::|....|..:|.:.
 Frog   274 -HGCERYSSLRNHRSAPYPSPYVHRNNSPN-NLADNSSACLSMLQSHDNWSTLQMPAHTGMLPMS 336

Human   341 HTNGPINPGPSPYPCLWTISNGAGGPSGPGPEVHASTPGAFLLGNPAVTSPPSVLSTQAPTSA-G 404
            |:.| ..|..|.||.||::||....|......:.......:|.|:   |...|.||...|:.| |
 Frog   337 HSAG-TPPTSSQYPSLWSVSNSTLTPVSQSGGITNGISSQYLRGS---TPHYSSLSHAVPSPATG 397

Human   405 VEVLGEPSLTSIA------------VSTWTAVA 425
            ..:....|.|.||            .||||.||
 Frog   398 SPLYEHGSQTEIAENQYDVTAHSRLSSTWTTVA 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBX19NP_005140.1 T-box_TBX19-like 36..218 CDD:410327 148/181 (82%)
tbxtNP_001008139.1 T-box_TBXT_TBX19-like 42..219 CDD:410318 144/176 (82%)

Return to query results.
Submit another query.