DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBX19 and tbx19

DIOPT Version :9

Sequence 1:NP_005140.1 Gene:TBX19 / 9095 HGNCID:11596 Length:448 Species:Homo sapiens
Sequence 2:XP_003198807.1 Gene:tbx19 / 100538180 ZFINID:ZDB-GENE-110411-5 Length:436 Species:Danio rerio


Alignment Length:430 Identity:266/430 - (61%)
Similarity:313/430 - (72%) Gaps:19/430 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     9 RKPSDGTVSHLLNVVESELQAGREKGDPTEKQLQIILEDAPLWQRFKEVTNEMIVTKNGRRMFPV 73
            |..:|..::.||:||||||||||||||||||||::.||||.||::||||||||||||||||||||
Zfish    17 RGGNDCCITRLLSVVESELQAGREKGDPTEKQLKVSLEDAELWRKFKEVTNEMIVTKNGRRMFPV 81

Human    74 LKISVTGLDPNAMYSLLLDFVPTDSHRWKYVNGEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKA 138
            ||:||||||||||||.||||.|.|.|||||||||||||||||..|||||||||||||||||||||
Zfish    82 LKVSVTGLDPNAMYSFLLDFTPADGHRWKYVNGEWVPAGKPEPHSHSCVYIHPDSPNFGAHWMKA 146

Human   139 PISFSKVKLTNKLNGGGQIMLNSLHKYEPQVHIVRVGSAHRMVTNCSFPETQFIAVTAYQNEEIT 203
            |:||:|||||||||||||||||||||||||:||||||.:||||||.||.:|||||||||||||||
Zfish   147 PVSFNKVKLTNKLNGGGQIMLNSLHKYEPQIHIVRVGGSHRMVTNISFTDTQFIAVTAYQNEEIT 211

Human   204 ALKIKYNPFAKAFLDAKERNHLRDVPEAISESQHVTYSHLGGWIFSNPDGVCTAGNSNYQYAAPL 268
            |||||:|||||||||||||:|.::..|...|:||:...|. ||..||||.:|:|...|:.|...|
Zfish   212 ALKIKHNPFAKAFLDAKERSHPKNHLEPPVENQHMGIPHC-GWFISNPDSLCSASGGNFPYPGGL 275

Human   269 PLPAPHTHHGCEHYSGLRGHRQAPYPSAYM----HRNHSPSVNLIESSSNNLQVFSGPDSWTSLS 329
            ||  .|.|||.:||..|.|||.|||||.|:    ||.|: :|:|.::.|..:|:|||.:|||.:|
Zfish   276 PL--THHHHGYKHYPSLHGHRAAPYPSPYLPRHHHRGHN-TVSLSDNLSPGVQMFSGHESWTGVS 337

Human   330 STPHASILSV-PHTNGPINPGPSPYPCLWTISNGAGGPSGPGPEV---HASTPGAFLLGNPAVTS 390
            ....|::||: |..|.|  ...|.||||||:|:.....|.||..|   |.....|.  |.....|
Zfish   338 PPGPAAMLSMQPAPNSP--GASSQYPCLWTVSSCTVSSSPPGGVVSLTHGQDEPAD--GASTSAS 398

Human   391 PPSVLSTQAPTSAGVEVLGEPSLTS-IAVSTWTAVASHPF 429
            |.|:|....||.:...|  :|:..| :...:|.:|.:|.|
Zfish   399 PCSLLQAHGPTGSDGSV--DPANHSRVGGMSWASVTTHSF 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBX19NP_005140.1 T-box 43..218 CDD:307177 153/174 (88%)
tbx19XP_003198807.1 TBOX 48..230 CDD:238106 159/181 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194342966
Domainoid 1 1.000 333 1.000 Domainoid score I6367
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3779
Inparanoid 1 1.050 510 1.000 Inparanoid score I6368
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG41562
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 1 1.000 - - FOG0002920
OrthoInspector 1 1.000 - - otm28332
orthoMCL 1 0.900 - - OOG6_119391
Panther 1 1.100 - - LDO PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1616.270

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