DRSC/TRiP Functional Genomics Resources

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Protein Alignment SH2D2A and si:ch73-109i22.2

DIOPT Version :10

Sequence 1:XP_016858251.1 Gene:SH2D2A / 9047 HGNCID:10821 Length:405 Species:Homo sapiens
Sequence 2:XP_698916.2 Gene:si:ch73-109i22.2 / 570350 ZFINID:ZDB-GENE-141211-57 Length:524 Species:Danio rerio


Alignment Length:385 Identity:113/385 - (29%)
Similarity:156/385 - (40%) Gaps:102/385 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    76 LQAETRAWFQKTQAHWLLQHG-AAPAWFHGFITRRVRPPLSVTHREAERLLEPKPQGCYLVRFSE 139
            |:|.|..||::||...|...| ..|.|.|||.||          ||||:||:.||.||:|:|.||
Zfish   102 LRANTLLWFERTQLPRLQTPGQPLPCWLHGFATR----------REAEQLLQDKPLGCFLLRLSE 156

Human   140 SAVTFVLTYRSRTCCRHFLLAQLRDGR----HVVLGEDSAHARLQDLLLHYTAHPLSPYGETLTE 200
            |.:.|||:||....||||::.:...|.    :::.||.|.|..|::|:.:||.:|:.|:.|.||.
Zfish   157 SKIGFVLSYRGEDRCRHFIIEEEESGAFGSVYLIAGESSHHKSLENLISYYTQNPVGPFNELLTV 221

Human   201 PLARQTPEPAGLS----LRTEESNFGSKSQDPNPQYS-------PIIKQGQAPVPMQKEGA-GEK 253
            |.   |....|:.    ||.:|:....|:.|...:..       .::.|.....|.|...| ||.
Zfish   222 PC---TQPYVGIEEIERLRNKETEVNGKATDQEEKTKLPLAIGPAVLNQLPTNPPNQITSATGET 283

Human   254 EPSQLLRPKPPIPAKPQLP-PEVYTI-----PVPRHRPA-PRPKPSNPIY-----NEPDEPIAFY 306
            .....:|.    |.|..|. ||...:     ||..:..| |..:||||..     :..|.|   |
Zfish   284 VQYAAIRK----PLKKTLSLPECKCVAETAPPVLENGTAEPAERPSNPNLTGDQAHTVDAP---Y 341

Human   307 AMGRGSP---GEAPSNIYVEVEDEGLPATLGHPVL--------RKSW---------------SRP 345
            |..:..|   .|..|||..:.:.:|..|....|.:        .|.|               |||
Zfish   342 ARVKKLPKAVSENTSNISTDPDLQGATAAFTPPSIPNFDSTADPKYWQLEPLHTYEETPFTHSRP 406

Human   346 ------VPGGQ-------------------NTGGSQLHSENSVIGQGPPLPHQPPPAWRH 380
                  ..|.:                   |..|:|  ..|:|...||.||.:|||...|
Zfish   407 EDIDCYAVGWRRQANEDAVNLLKNHEYSEVNIKGAQ--EGNAVPRPGPSLPLRPPPRSTH 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SH2D2AXP_016858251.1 SH2 93..204 CDD:472789 47/115 (41%)
PABP-1234 <159..293 CDD:130689 39/156 (25%)
si:ch73-109i22.2XP_698916.2 SH2 121..223 CDD:472789 46/111 (41%)

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