DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RPL14 and rpl-14

DIOPT Version :10

Sequence 1:NP_003964.3 Gene:RPL14 / 9045 HGNCID:10305 Length:215 Species:Homo sapiens
Sequence 2:NP_492576.1 Gene:rpl-14 / 172818 WormBaseID:WBGene00004426 Length:135 Species:Caenorhabditis elegans


Alignment Length:133 Identity:64/133 - (48%)
Similarity:89/133 - (66%) Gaps:0/133 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFP 65
            |||.|.|::|||.:::.|...|||.|||:|||.||..:|||.:.|.|.....|.:|||.|:||..
 Worm     1 MVFNRVVQIGRVVFIASGKDQGKLAAIVNVIDGNRVQIDGPSSDVTRTVRNLKDLQLTKFVLKLR 65

Human    66 HSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKL 130
            .....|.|:.|:..|.:...:..|:|||||..|..:||:|||:|:|:||||:|||||::.|:.||
 Worm    66 VGQRTKGVKAAFDAAKVTENFQKTQWAKKIAQRAIRAKLTDFERYKLMKAKQMRNRIVRVELAKL 130

Human   131 QKA 133
            :||
 Worm   131 KKA 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPL14NP_003964.3 eL14 5..123 CDD:467915 55/117 (47%)
valS <123..210 CDD:237855 5/11 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..215
4 X 5 AA tandem repeats of Q-K-A-[PAS]-X 171..190
2 X 3 AA tandem repeats of K-[GA]-Q 193..198
rpl-14NP_492576.1 eL14 5..123 CDD:467915 55/117 (47%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.