DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment UBE2M and eff

DIOPT Version :10

Sequence 1:NP_003960.1 Gene:UBE2M / 9040 HGNCID:12491 Length:183 Species:Homo sapiens
Sequence 2:NP_731941.1 Gene:eff / 41785 FlyBaseID:FBgn0011217 Length:147 Species:Drosophila melanogaster


Alignment Length:135 Identity:48/135 - (35%)
Similarity:75/135 - (55%) Gaps:8/135 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    33 RIQKDINEL--NLPKTCDISFSDP--DDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPK 92
            ||.|::.:|  :.|..|.   :.|  |||.:::..|. |.:..|:.|.|..:......||..|||
  Fly     5 RINKELQDLGRDPPAQCS---AGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPK 66

Human    93 VKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNR 157
            |...|.:|||||:..|::||:|||..|.|.|||:.::..:..|..:|||:|||..|.|.:.:.:|
  Fly    67 VAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDR 131

Human   158 RLFEQ 162
            ..:.:
  Fly   132 EKYNE 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBE2MNP_003960.1 Interaction with UBA3 1..57 8/27 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
UBCc_UBE2F_UBE2M 29..166 CDD:467414 48/135 (36%)
effNP_731941.1 UBCc_UBE2D 3..145 CDD:467412 48/135 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.