DRSC/TRiP Functional Genomics Resources

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Protein Alignment SAMD1 and spex-3

DIOPT Version :10

Sequence 1:NP_612361.1 Gene:SAMD1 / 90378 HGNCID:17958 Length:538 Species:Homo sapiens
Sequence 2:NP_497447.1 Gene:spex-3 / 175321 WormBaseID:WBGene00021263 Length:69 Species:Caenorhabditis elegans


Alignment Length:18 Identity:8/18 - (44%)
Similarity:10/18 - (55%) Gaps:3/18 - (16%)


- Green bases have known domain annotations that are detailed below.


Human   442 DGTPFGCPPGRKEKPSDP 459
            ||..||   ||...|::|
 Worm    42 DGWEFG---GRAPCPANP 56

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SAMD1NP_612361.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..247
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..458 7/15 (47%)
SAM_Atherin-like 459..527 CDD:188982 1/1 (100%)
spex-3NP_497447.1 None
Blue background indicates that the domain is not in the aligned region.

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