DRSC/TRiP Functional Genomics Resources

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Protein Alignment PKD2L1 and brv3

DIOPT Version :10

Sequence 1:NP_057196.2 Gene:PKD2L1 / 9033 HGNCID:9011 Length:805 Species:Homo sapiens
Sequence 2:NP_001284831.1 Gene:brv3 / 31246 FlyBaseID:FBgn0040333 Length:750 Species:Drosophila melanogaster


Alignment Length:740 Identity:162/740 - (21%)
Similarity:300/740 - (40%) Gaps:163/740 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    98 KTTLRELLVYIVFLVDICLLTYGMTSSSAYYYTKVMSELFLHTPSD-TGVSFQAISSMADFWDFA 161
            |....:|.:|..:.:.:..|.......:.|:.|:::::||::..:| ||:  |.:..:...:||.
  Fly   123 KMIAHDLFIYGPYFLCLMCLVLVTRDQTLYHNTRIITDLFMYNHTDYTGL--QEVYFLNQLFDFI 185

Human   162 QGPLLDSLYWTKWYNNQSLGHGSHSFIYYE-NMLLGVPRLRQLKVRNDSCVVHEDFREDILSCYD 225
            :..|:.:      :|:.|...||..:.:.| ::||||.|||||:|.|....:......|     .
  Fly   186 ESTLVLA------FNSNSTESGSPGWAHAEQSVLLGVMRLRQLRVSNPQVGLGPPKFSD-----T 239

Human   226 VYSPDKEEQLPFGP--FNGTAWTYHS------------QDELGGFSHWGRLTSYSG-GGYYLDLP 275
            .|.||  .|||:..  ::...|..:.            ...|..|.|.|.|.||.. .||...|.
  Fly   240 YYMPD--WQLPYRKLHYSDKYWRIYEPWIPIKMGFEFLDALLMNFDHVGSLNSYPELAGYVSLLA 302

Human   276 GSRQGSAEALRALQEGLWLDRGTRVVFIDFSVYNANINLFCVLRLVVEFPATGGAIPSWQIRTVK 340
            .|...|.:.:..|.|..||...|..|||||::||.::|||.:..|.||....||.:|..|:.:.|
  Fly   303 RSAANSMKVIDYLSENHWLTLNTSAVFIDFTLYNVDVNLFSICTLRVEKTPFGGIVPDVQVDSAK 367

Human   341 LIRYVSNWDFF-IVGCEVIFCVFIFY---YVVEEILELHIHRLRYLSSIWNILDLVVILLSIVAV 401
            |:..|....:. ::...:...|||.:   ..|:...|.|:     |.|:||.|||.:.:::::.|
  Fly   368 LLENVDQMPYTGLLALLIYVLVFIQFAQTLAVKLWYEPHL-----LKSVWNKLDLFIFMVNVLVV 427

Human   402 GFHIFRTLEVNRLMGKLLQQPNTYADFEFLAFWQ-TQYNNMNAVNLFF----AWIKIFKYISFNK 461
            ...:.|    ..|:..::::....:..||:.|.: ::.:.:..:.:.|    ..:::::.:.|..
  Fly   428 VLVVLR----ESLVASMMKKVEGASKMEFIDFRRPSRMHQLTTITIGFLICITTLRLWRVLQFAS 488

Human   462 TMTQLSST--LARCAKDILGFAVMFFIVFFAYAQLGYLLFGTQVENFSTFIKCIFTQFRIILGDF 524
            .....:.|  ||..|......|::.|::.|.:|.:  .:.|....||:..:|   :....:...|
  Fly   489 VFKLFTRTLYLAWSAVASTAIAIVIFLIGFCFAVV--TINGNYSSNFNKLVK---SMVMCMCYSF 548

Human   525 DYNA------IDNANRILGPAYFVTYVFFVFFVLLNMFLAIINDTYSEVKEELAGQKDELQLSDL 583
            .::|      :.:..:.||...:....|.:..:|:|:|:::|||.::                  
  Fly   549 GFSAQVKPSELFHGGKWLGILCYGVLAFVIIVLLINVFVSLINDYFT------------------ 595

Human   584 LKQGYNKTLLRLRLRKERVSDVQKVLQGGEQEIQFEDFTNTLRELGHAEHEITELTATFTKFDRD 648
                                 |.|.::..|:|.:...|...:.|.........:|......:.|:
  Fly   596 ---------------------VAKTIRDSERENRITFFEFLVVEFSGVLGRFRKLPCWRRNYVRN 639

Human   649 G-------NRILDEKEQEK-MRQDLEEERVALNTEIEKLGRSIVSSPQGKSGPEAARAGGWVSGE 705
            |       :|.||..:::: ||:.|.:            ||..||.|              ||.|
  Fly   640 GRTVAENVSRKLDSMDRQRLMRRRLRQ------------GRHHVSRP--------------VSAE 678

Human   706 EFYMLTRRVLQLETVLEGVVSQIDAVGSKLKML------ERKGWLAPSPGVKEQAIWKHPQPAPA 764
            :      .:|:.:...:.:|:....:..:|.::      |...|      .:||.  |.|:   |
  Fly   679 D------ALLEYKDRGDKMVNVHYILNIQLTLIRMFLFDEYVEW------PQEQQ--KQPE---A 726

Human   765 VTPDP-WGVQGGQESEVPYKREEEA 788
            ..||| .|..|....:   ||::||
  Fly   727 QDPDPNLGPDGSPPQD---KRQDEA 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PKD2L1NP_057196.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..59
Polycystin_dom 147..342 CDD:466668 63/210 (30%)
PKD_channel 343..567 CDD:462341 45/240 (19%)
Fer4_24 702..735 CDD:436280 5/32 (16%)
Required for homooligomerization 704..763 10/64 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 759..805 11/31 (35%)
brv3NP_001284831.1 Polycystin_dom 171..369 CDD:466668 64/212 (30%)
PKD_channel 370..595 CDD:462341 45/238 (19%)
Blue background indicates that the domain is not in the aligned region.

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