DRSC/TRiP Functional Genomics Resources

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Protein Alignment RHBDL1 and rho-4

DIOPT Version :10

Sequence 1:XP_016879338.1 Gene:RHBDL1 / 9028 HGNCID:10007 Length:469 Species:Homo sapiens
Sequence 2:NP_525084.1 Gene:rho-4 / 32109 FlyBaseID:FBgn0030318 Length:417 Species:Drosophila melanogaster


Alignment Length:426 Identity:108/426 - (25%)
Similarity:164/426 - (38%) Gaps:108/426 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    28 IKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWSRGRARTQALAGGSSLQQLDPENTGFIGADT 92
            :|...|:|:.| |..|...:.:.|..:...|.:.:..|:              .|.....:..||
  Fly     3 VKTVNRQQSQT-PAQQLQLQQQRDVENGLYPTIPAERRS--------------PPSRPQTLRQDT 52

Human    93 FTGLVHSHELPL---------DPAKLDMLVALAQSNEQGQVCYQELVDLISSKRSSSFKRAIANG 148
                :...|:||         |..|:..:.....|:..|.:...||.:|||..........||: 
  Fly    53 ----IDMEEIPLNQTNSQEPEDRRKMHEIFDKHDSDRDGLINTHELKELISDGYCRDIPAYIAD- 112

Human   149 QRALPR-----DGPLDEPGL------------GVYKRFVRYVAYEILPCEVDRRWYFYRHRS--C 194
             :.|.|     ||.||....            .:..|:.|||.....|.|.|.....|..:.  |
  Fly   113 -QILKRSDQDNDGHLDFEEFYAMSLRHKWMVRNMLTRYCRYVVPPPKPLEGDEPDGAYEKQMSIC 176

Human   195 PPPVFMASVTLAQIIVFLCYGARLNKWVLQTYH----PEYM-------KSP----LVYHPGHRAR 244
            |||:.|...::.:||:||          :...|    |.|.       ..|    .:|:|..|..
  Fly   177 PPPLTMVLFSIIEIIMFL----------VDVIHFQDDPNYQDRIGESTSGPAATLFIYNPYKRYE 231

Human   245 AWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLYLAGVLA-ELGWDEMSLQVAED 308
            .|||::|||:|||:..|..|.::|:.:|:.||:||...|:.|:||||||| .:|....|.::...
  Fly   232 GWRFVSYMFVHVGIMHLMMNLIIQIFLGIALELVHHWWRVGLVYLAGVLAGSMGTSLTSPRIFLA 296

Human   309 GAGLGVHELRGGPGRVAALLPAAAR------------------LGPTAQLHGAPGRRGGGGEHGP 355
            ||..||:.|.  ...:|.::...:.                  ||.:...|..       .:|..
  Fly   297 GASGGVYALI--TAHIATIIMNYSEMEYAIVQLLAFLVFCFTDLGTSVYRHLT-------DQHDQ 352

Human   356 -DHPAELRGAPAGPVRLVGGAAGLRHLPALR--RLL 388
             .:.|.|.||.||   |:.|...||:|...|  |:|
  Fly   353 IGYVAHLSGAVAG---LLVGIGVLRNLEVRRWERIL 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RHBDL1XP_016879338.1 Rhomboid 239..>294 CDD:451297 26/54 (48%)
rho-4NP_525084.1 FRQ1 <49..131 CDD:444056 22/87 (25%)
Rhomboid 226..374 CDD:426384 48/159 (30%)

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