DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FRMD7 and Frmd7

DIOPT Version :9

Sequence 1:NP_919253.1 Gene:FRMD7 / 90167 HGNCID:8079 Length:714 Species:Homo sapiens
Sequence 2:NP_001177261.1 Gene:Frmd7 / 385354 MGIID:2686379 Length:703 Species:Mus musculus


Alignment Length:714 Identity:608/714 - (85%)
Similarity:643/714 - (90%) Gaps:11/714 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MLHLKVQFLDDSQKIFVVDQKSSGKALFNLSCSHLNLAEKEYFGLEFCSHSGNNVWLELLKPITK 65
            ||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Mouse     1 MLHLKVQFLDDSQKIFVVDQKSSGKALFNLSCGHLNLAEKEYFGLEFCSHSGNNVWLELLKPITK 65

Human    66 QVKNPKEIVFKFMVKFFPVDPGHLREELTRYLFTLQIKKDLALGRLPCSDNCTALMVSHILQSEL 130
            |||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse    66 QVKNPKEVVFKFMVKFFPVDPGHLREELTRYLFTLQIKKDLALGRLPCSDNCTALMVSHILQSEL 130

Human   131 GDFHEETDRKHLAQTRYLPNQDCLEGKIMHFHQKHIGRSPAESDILLLDIARKLDMYGIRPHPAS 195
            |||||||.||||.||:|||:|..||.|||.|||:|||||||||||||||||||||||||||.|||
Mouse   131 GDFHEETVRKHLVQTQYLPSQASLESKIMQFHQQHIGRSPAESDILLLDIARKLDMYGIRPQPAS 195

Human   196 DGEGMQIHLAVAHMGVLVLRGNTKINTFNWAKIRKLSFKRKHFLIKLHANILVLCKDTLEFTMAS 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   196 DGEGMQIHLAVAHMGVLVLRGNTKINTFNWAKIRKLSFKRKHFLIKLHANILVLCKDTLEFTMAS 260

Human   261 RDACKAFWKTCVEYHAFFRLSEEPKSKPKTLLCSKGSSFRYSGRTQRQLLEYGRKGRLKSLPFER 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||
Mouse   261 RDACKAFWKTCVEYHAFFRLSEEPKSKPKTLLCSKGSSFRYSGRTQRQLLEYGKKGRLKSLPFER 325

Human   326 KHYPSQYHERQCRSSPDLLSDVSKQVEDLRLAYGGGYYQNVNGVHASEPVLESRRRNSALEVTFA 390
            |.|||||||||||||||:|||||||||||||.||..||:|||||||||.:|:|||||||:|||||
Mouse   326 KQYPSQYHERQCRSSPDILSDVSKQVEDLRLTYGSSYYRNVNGVHASESMLDSRRRNSAVEVTFA 390

Human   391 TELEHSKPEADPTLLHQSQSSSSFPFIYMDPVFNTEPNPNPDPRDIFSERSSLSSFQTSCKFSGN 455
            .|||||||||:.|.||.|||||||.|||.||||||:    |:|.:.|.|||.||||||:.||:.:
Mouse   391 AELEHSKPEAEATSLHPSQSSSSFTFIYADPVFNTD----PEPIEFFEERSPLSSFQTTSKFADS 451

Human   456 HMSIYSGLTSKVRPAKQLTYTDVPYIPCTGQQVGIMPPQVFFYVDKPPQVPRWSPIRAEERTSPH 520
            |       |||..||:|||||||||||||.|:|.||||||||||||||||||.|.|.|||...|.
Mouse   452 H-------TSKASPARQLTYTDVPYIPCTSQKVDIMPPQVFFYVDKPPQVPRRSLIMAEENMRPD 509

Human   521 SYVEPTAMKPAERSPRNIRMKSFQQDLQVLQEAIARTSGRSNINVGLEEEDPNLEDAFVCNIQEQ 585
            |||:.:|:|||:|||||:|:||.|||||.||||:|||||||||||..|||||:|:|||..|:|||
Mouse   510 SYVDHSAIKPAKRSPRNMRIKSLQQDLQELQEAMARTSGRSNINVEPEEEDPHLDDAFAYNLQEQ 574

Human   586 TPKRSQSQSDMKTIRFPFGSEFRPLGPCPALSHKADLFTDMFAEQELPAVLMDQSTAERYVASES 650
            |||||||||||||||||||||||||||||||:.|.|||...|||||.|.||:|||:|||||||||
Mouse   575 TPKRSQSQSDMKTIRFPFGSEFRPLGPCPALTRKTDLFACTFAEQEFPTVLIDQSSAERYVASES 639

Human   651 SDSESEILKPDYYALYGKEIRSPMARIRLSSGSLQLDEEDEDAYFNTPTAEDRTSLKPCNYFLA 714
            |||||||:|||||.||||..:||.||||||||||||:||||...|.||.|||||.|||||||||
Mouse   640 SDSESEIIKPDYYFLYGKGTKSPRARIRLSSGSLQLEEEDETISFATPGAEDRTLLKPCNYFLA 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FRMD7NP_919253.1 B41 3..192 CDD:214604 177/188 (94%)
FERM_N 6..69 CDD:286467 61/62 (98%)
FERM_M 88..192 CDD:278785 94/103 (91%)
FERM_C_FARP1-like 179..299 CDD:270014 118/119 (99%)
FA 294..327 CDD:285894 31/32 (97%)
Frmd7NP_001177261.1 FERM_F1_FRMD7 1..86 CDD:340708 82/84 (98%)
FERM_M 85..191 CDD:366056 96/105 (91%)
FERM_C_FARP1-like 179..299 CDD:270014 118/119 (99%)
FA 294..330 CDD:370090 33/35 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83968108
Domainoid 1 1.000 572 1.000 Domainoid score I5659
eggNOG 1 0.900 - - E1_KOG3531
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H18855
Inparanoid 1 1.050 1216 1.000 Inparanoid score I4281
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG37156
OrthoDB 1 1.010 - - D224825at33208
OrthoFinder 1 1.000 - - FOG0006343
OrthoInspector 1 1.000 - - oto122098
orthoMCL 1 0.900 - - OOG6_118956
Panther 1 1.100 - - LDO PTHR45858
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7122
SonicParanoid 1 1.000 - - X8920
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1818.300

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