DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACVR1 and acvr1

DIOPT Version :9

Sequence 1:NP_001096.1 Gene:ACVR1 / 90 HGNCID:171 Length:509 Species:Homo sapiens
Sequence 2:NP_001017357.1 Gene:acvr1 / 550111 XenbaseID:XB-GENE-478850 Length:512 Species:Xenopus tropicalis


Alignment Length:512 Identity:417/512 - (81%)
Similarity:463/512 - (90%) Gaps:3/512 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MVDGVMILPVLIMIALPSPSMEDEKPKVNPKLYMCVCEGLSCGNEDHCEGQQCFSSLSINDGFHV 65
            |||||||||:|:|:|..|||||||:.|:|...|.|||||:|||:.|||.|||||:|||.|||..|
 Frog     1 MVDGVMILPILMMVAFSSPSMEDEEMKLNAGQYKCVCEGMSCGSGDHCYGQQCFASLSNNDGVLV 65

Human    66 YQKGCFQVYEQGKMTCKTPPSPGQAVECCQGDWCNRNITAQL-PTKGKSFPG-TQNFHLE-VGLI 127
            .||||||||||||||||||||..|||||||.|.||.|||.:: ...|::..| ..|:.:| :.:.
 Frog    66 SQKGCFQVYEQGKMTCKTPPSQDQAVECCQSDLCNMNITVKITDLTGRTKQGEAPNYSVETLTIF 130

Human   128 ILSVVFAVCLLACLLGVALRKFKRRNQERLNPRDVEYGTIEGLITTNVGDSTLADLLDHSCTSGS 192
            ||:.|..:.:|:.|..:..||.::|:.:.|:.||.|||||:|||.:||||||||::|||||||||
 Frog   131 ILAPVIVLVVLSVLAVLIFRKIQQRHMQMLSNRDAEYGTIDGLIASNVGDSTLAEMLDHSCTSGS 195

Human   193 GSGLPFLVQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVML 257
            ||||||||||||||||||.||||||||||||||.||||:||||||||||||||||||||||||:|
 Frog   196 GSGLPFLVQRTVARQITLAECVGKGRYGEVWRGLWQGESVAVKIFSSRDEKSWFRETELYNTVLL 260

Human   258 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIE 322
            ||||||||||||||||:|||||||||||||:||||||||:||||:|:||||||||||||||||:|
 Frog   261 RHENILGFIASDMTSRNSSTQLWLITHYHELGSLYDYLQVTTLDSVTCLRIVLSIASGLAHLHVE 325

Human   323 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 387
            ||||||||||:||||||||:|||||||||||||||||||||:|||||||||||||||||||||||
 Frog   326 IFGTQGKPAISHRDLKSKNVLVKKNGQCCIADLGLAVMHSQTTNQLDVGNNPRVGTKRYMAPEVL 390

Human   388 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQ 452
            |||||||||||||||||:||||||||||||||||||||:||||||||||||||||||:|||||||
 Frog   391 DETIQVDCFDSYKRVDIYAFGLVLWEVARRMVSNGIVEEYKPPFYDVVPNDPSFEDMKKVVCVDQ 455

Human   453 QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKIDNSLDKLKTDC 509
            ||||||||||||||||:|||||||||||||||||||||||||||||||||||||:||
 Frog   456 QRPNIPNRWFSDPTLTALAKLMKECWYQNPSARLTALRIKKTLTKIDNSLDKLKSDC 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACVR1NP_001096.1 Activin_recp 37..103 CDD:395845 51/65 (78%)
TGF_beta_GS 179..206 CDD:400699 24/26 (92%)
STKc_ACVR1_ALK1 202..499 CDD:271044 279/296 (94%)
acvr1NP_001017357.1 Activin_recp 33..104 CDD:279413 55/70 (79%)
TGF_beta_GS 182..209 CDD:285687 24/26 (92%)
STKc_ACVR1_ALK1 205..502 CDD:271044 279/296 (94%)
S_TKc 215..496 CDD:214567 264/280 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 567 1.000 Domainoid score I2772
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H7
Inparanoid 1 1.050 858 1.000 Inparanoid score I3985
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D111967at7742
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 1 1.000 - - oto150730
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X151
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.060

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