DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACVR1 and daf-1

DIOPT Version :9

Sequence 1:NP_001096.1 Gene:ACVR1 / 90 HGNCID:171 Length:509 Species:Homo sapiens
Sequence 2:NP_001023159.1 Gene:daf-1 / 176829 WormBaseID:WBGene00000897 Length:669 Species:Caenorhabditis elegans


Alignment Length:562 Identity:177/562 - (31%)
Similarity:264/562 - (46%) Gaps:109/562 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    24 EKPKVN-PKLYMCVCE--------------GLSCGNEDHCEGQQCFSSLSINDGFHVYQK----- 68
            |..||| .:|::|.|.              |:...||   ..:..:.:....|| ..||.     
 Worm    44 EVTKVNFTRLHLCHCSREVGCNARTTGWVPGIEFLNE---TDRSFYENTCYTDG-SCYQSARPSP 104

Human    69 -----GCF---------QVYEQGKMTCKTPPSPGQAVE--CC-QGDWCNRNITAQLPTKGKSFPG 116
                 ||.         :.::.....|........|..  || :|::|.......|.      ||
 Worm   105 EISHFGCMDEKSVTDETEFHDTAAKVCTNNTKDPHATVWICCDKGNFCANETIIHLA------PG 163

Human   117 TQNFHLEVGLIILSVV-FAVCLLACLLGVAL---RK-----------FKRRNQERLNPRD----- 161
            .|.....:.|.||::: |.|     |||:|:   ||           ||.:..:.|...:     
 Worm   164 PQQSSTWLILTILALLTFIV-----LLGIAIFLTRKSWEAKFDWYIRFKPKPGDPLRETENNVPM 223

Human   162 -----------VEYGTIE---GLITTNVGDS--------TLADLLD-HSCTSGSGSGLPFLVQRT 203
                       .|...||   ..::|:.|:|        .:.|:|| ...|||||.|...|.:.|
 Worm   224 VTMGDGAGSSVPEVAPIEQQGSTMSTSAGNSFPPGIMPNNMKDMLDVLEETSGSGMGPTTLHKLT 288

Human   204 VARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIAS 268
            :..||.|...||.||:|.|.||.::||.||||:|::.||.::.:|||::.|.||||.|:|.:|.|
 Worm   289 IGGQIRLTGRVGSGRFGNVSRGDYRGEAVAVKVFNALDEPAFHKETEIFETRMLRHPNVLRYIGS 353

Human   269 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ--GKPA 331
            |.......|:|||:|.||..|||:|:|...|::..:...::.|.|||||.||.:|.|::  .|||
 Worm   354 DRVDTGFVTELWLVTEYHPSGSLHDFLLENTVNIETYYNLMRSTASGLAFLHNQIGGSKESNKPA 418

Human   332 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ-STNQLDVGNNPRVGTKRYMAPEVLDETIQVDC 395
            :||||:|||||:||.:..|.|.||||::...: :.:.:....|.:.||.||:|||:|:.|:|...
 Worm   419 MAHRDIKSKNIMVKNDLTCAIGDLGLSLSKPEDAASDIIANENYKCGTVRYLAPEILNSTMQFTV 483

Human   396 FDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP-------PFYDVVPNDPSFEDMRKVVCVDQQ 453
            |:||:..|:::|.||:||...|....    |..|       |:.:....||....|..|||..:.
 Worm   484 FESYQCADVYSFSLVMWETLCRCEDG----DVLPREAATVIPYIEWTDRDPQDAQMFDVVCTRRL 544

Human   454 RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 495
            ||.....|...|.:..:.:::|.||..|||||.|:...:|.:
 Worm   545 RPTENPLWKDHPEMKHIMEIIKTCWNGNPSARFTSYICRKRM 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACVR1NP_001096.1 Activin_recp 37..103 CDD:395845 16/101 (16%)
TGF_beta_GS 179..206 CDD:400699 11/27 (41%)
STKc_ACVR1_ALK1 202..499 CDD:271044 121/304 (40%)
daf-1NP_001023159.1 GS 265..293 CDD:197743 11/27 (41%)
Pkinase_Tyr 293..576 CDD:285015 115/286 (40%)
STKc_TGFbR_I 297..589 CDD:270958 117/294 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161451964
Domainoid 1 1.000 236 1.000 Domainoid score I1477
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I2302
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 1 1.000 - - otm16226
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X151
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.890

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