DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RHOT2 and rhot2

DIOPT Version :10

Sequence 1:NP_001339204.1 Gene:RHOT2 / 89941 HGNCID:21169 Length:619 Species:Homo sapiens
Sequence 2:NP_001032768.1 Gene:rhot2 / 557574 ZFINID:ZDB-GENE-051120-96 Length:617 Species:Danio rerio


Alignment Length:626 Identity:409/626 - (65%)
Similarity:479/626 - (76%) Gaps:28/626 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MRRDVRILLLGEAQVGKTSLILSLVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSEAEQTD 65
            |:||||||||||.:|||||||:|||||||||:||.|||||||||||||||||||||||||.||||
Zfish     1 MKRDVRILLLGEPKVGKTSLIMSLVGEEFPEQVPLRAEEITIPADVTPEKVPTHIVDYSENEQTD 65

Human    66 EELREEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGGTTQGPRVPIILVGNKSDLRSGSSMEA 130
            |.|||||.|||||||||||::|.||:|||||||||||||..:|.::||||||||||||||||||.
Zfish    66 EVLREEIVKANVVCVVYDVTQEETIDKIRTKWIPLVNGGAEKGSKIPIILVGNKSDLRSGSSMET 130

Human   131 VLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRL 195
            :||||:||.|||||||||||||:||||||||||||||||||||||||.|||:..|.:||:|||.:
Zfish   131 ILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEDKQLKAQCVRALSRIFSI 195

Human   196 SDQDLDQALSDEELNAFQQKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTLDGFLFLNTLFI 260
            ||||.|..|||.|||.| ||.|||:||||||||||||||.:|.:.||:::.|||:||||||||||
Zfish   196 SDQDNDHILSDAELNCF-QKLCFGNPLAPQALEDVKTVVWKNTSDGVQDNGLTLNGFLFLNTLFI 259

Human   261 QRGRHETTWTILRRFGYSDALELTADYLSPLIHVPPGCSTELNHLGYQFVQRVFEKHDQDRDGAL 325
            |||||||||||||:|||.|.||||.|||.|::.|..||:|||||||:||:.::|||:|:|:|.||
Zfish   260 QRGRHETTWTILRKFGYDDTLELTDDYLYPVLRVSVGCTTELNHLGHQFLLKLFEKYDEDKDSAL 324

Human   326 SPVELQSLFSVFPAAPWGPELPRTVRTEAGRLPL--------HGYLCQWTLVTYLDVRSCLGHLG 382
            ||.||::||||.|..||.       .|....:||        |||||||.|:.||||..||.|||
Zfish   325 SPAELKNLFSVLPYMPWS-------STVYSNIPLTDDCYISQHGYLCQWMLLAYLDVHRCLEHLG 382

Human   383 YLGYPTLCEQD-QAHAITVTREKRLDQEKGQTQRSVLLCKVVGARGVGKSAFLQAFLGRGLGHQD 446
            |||||.|.||: |..||||||||.||.:..||||:|.||||:|.||.||:.||:|||.|.....|
Zfish   383 YLGYPILMEQECQTSAITVTREKALDLDNRQTQRTVFLCKVIGPRGTGKTDFLRAFLQRSTERSD 447

Human   447 TREQPPG----YAIDTVQVNGQEKYLILCEVGTDGLLATSLDATCDVACLMFDGSDPKSFAHCAS 507
               :.||    |||:||.:..|:|||||.||..:.....:.||.|||||||:|.|||.||.:|||
Zfish   448 ---RDPGAPSIYAINTVSIANQDKYLILEEVDVETEFLKAADAACDVACLMYDVSDPDSFNYCAS 509

Human   508 VYKHHYMDGQTPCLFVSSKADLPEGVAVSGPSPAEFCRKHRLPAPVPFSCAGPAEPSTTIFTQLA 572
            :||.||||...||:.:.|||||.|.....|.||:|||.|||||:|:.|| |......|.|:::|.
Zfish   510 IYKQHYMDSGIPCVVLGSKADLVEVKQHHGMSPSEFCYKHRLPSPLHFS-ALLTHTHTHIYSKLT 573

Human   573 TMAAFPHLVHAELHPSSFWLRGLLGVVGAAVAAVLSFSLYR 613
            ..|.:|||..:::..:|||||..|   ||.:||:|.|:|||
Zfish   574 WAAMYPHLNGSDMSSTSFWLRVTL---GATIAAMLGFALYR 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RHOT2NP_001339204.1 Miro1 3..169 CDD:206680 142/165 (86%)
EF_assoc_2 221..304 CDD:462444 61/82 (74%)
EF_assoc_1 342..409 CDD:462443 40/75 (53%)
Miro2 414..590 CDD:206679 88/179 (49%)
rhot2NP_001032768.1 Miro1 3..169 CDD:206680 142/165 (86%)
EF_assoc_2 220..303 CDD:462444 61/82 (74%)
EF_assoc_1 341..409 CDD:462443 39/74 (53%)
Miro2 415..591 CDD:206679 88/179 (49%)

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