DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RHOT2 and rhot2

DIOPT Version :10

Sequence 1:NP_001339204.1 Gene:RHOT2 / 89941 HGNCID:21169 Length:619 Species:Homo sapiens
Sequence 2:NP_001006725.1 Gene:rhot2 / 448378 XenbaseID:XB-GENE-489616 Length:616 Species:Xenopus tropicalis


Alignment Length:622 Identity:439/622 - (70%)
Similarity:500/622 - (80%) Gaps:9/622 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MRRDVRILLLGEAQVGKTSLILSLVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSEAEQTD 65
            |:|||||||||||||||||||::|||||||:|||.||||||||||||||::||||||||..|||:
 Frog     1 MKRDVRILLLGEAQVGKTSLIMALVGEEFPDEVPSRAEEITIPADVTPERIPTHIVDYSGVEQTE 65

Human    66 EELREEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGGTTQGPRVPIILVGNKSDLRSGSSMEA 130
            :||||||.|||||||||||::..|||||.:||||:|||...:..|:|||||||||||:.|||||:
 Frog    66 DELREEIAKANVVCVVYDVTDLETIEKIGSKWIPMVNGNAERNSRLPIILVGNKSDLQCGSSMES 130

Human   131 VLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRL 195
            :||||:||.|||||||||||||:||||:|||||||||||||||||||.|||||.|.:||||||.:
 Frog   131 ILPIMNQFSEIETCVECSAKNLKNISEVFYYAQKAVLHPTAPLYDPEEKQLRPQCKKALTRIFTI 195

Human   196 SDQDLDQALSDEELNAFQQKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTLDGFLFLNTLFI 260
            |:||.:|.|||||||.||| ||||:|||||||||||.||.:|.|.|||::.|||:||||||||||
 Frog   196 SEQDNNQILSDEELNFFQQ-SCFGNPLAPQALEDVKMVVKKNTADGVRDNGLTLNGFLFLNTLFI 259

Human   261 QRGRHETTWTILRRFGYSDALELTADYLSPLIHVPPGCSTELNHLGYQFVQRVFEKHDQDRDGAL 325
            |||||||||||||||||.||||||.|||.|.:.:|...||||||.||||:|:.|||||.|.||||
 Frog   260 QRGRHETTWTILRRFGYDDALELTDDYLYPPLRIPHESSTELNHFGYQFLQKAFEKHDLDEDGAL 324

Human   326 SPVELQSLFSVFPAAPWGPELPRTVRT-EAGRLPLHGYLCQWTLVTYLDVRSCLGHLGYLGYPTL 389
            ||.||||.|||||..||||||..||.| :.|.|||||||||||||.||||..||.||||||||.|
 Frog   325 SPSELQSFFSVFPYTPWGPELASTVCTAQGGYLPLHGYLCQWTLVAYLDVHRCLEHLGYLGYPIL 389

Human   390 CEQD-QAHAITVTREKRLDQEKGQTQRSVLLCKVVGARGVGKSAFLQAFLGRGLGHQDTREQPPG 453
            |||: |.|||||||||.:|.|||||||:|.||:|:|.||.||||||:||||:.|..|....:||.
 Frog   390 CEQESQTHAITVTREKSIDLEKGQTQRNVFLCRVIGPRGTGKSAFLRAFLGQSLEEQQQSNKPPS 454

Human   454 -YAIDTVQVNGQEKYLILCEVGTDGLLATSLDATCDVACLMFDGSDPKSFAHCASVYKHHYMDGQ 517
             |:::||.|.||||||||.||..|.....:.||.|||||||:|.||.|||.:|||:||.|||:.|
 Frog   455 FYSVNTVLVGGQEKYLILFEVDVDTEFLKTSDAPCDVACLMYDVSDSKSFNYCASIYKQHYMESQ 519

Human   518 TPCLFVSSKADLPEGVAVSGPSPAEFCRKHRLPAPVPFSCAGPAEPSTTIFTQLATMAAFPHLVH 582
            ||||||..|.|..|.....|.||||||.|||||.|..|:|.|  .|..||:::|||.||||||..
 Frog   520 TPCLFVGCKYDQGEVKQQHGISPAEFCHKHRLPPPYHFTCQG--TPDRTIYSKLATAAAFPHLHD 582

Human   583 AELHPSSFWLRGLLGVVGAAVAAVLSFSLYRVLVKSQ 619
            .||..:|||||..|   ||.||||:.|:||:.|::|:
 Frog   583 TELSTASFWLRVAL---GATVAAVVGFTLYKALLRSK 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RHOT2NP_001339204.1 Miro1 3..169 CDD:206680 132/165 (80%)
EF_assoc_2 221..304 CDD:462444 63/82 (77%)
EF_assoc_1 342..409 CDD:462443 51/68 (75%)
Miro2 414..590 CDD:206679 101/176 (57%)
rhot2NP_001006725.1 Miro1 3..169 CDD:206680 132/165 (80%)
EF_assoc_2 220..303 CDD:462444 63/82 (77%)
FRQ1 <307..>346 CDD:444056 29/38 (76%)
EF_assoc_1 341..410 CDD:462443 51/68 (75%)
Miro2 415..590 CDD:206679 101/176 (57%)

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