DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGLYRP1 and PGRP-SB2

DIOPT Version :10

Sequence 1:NP_005082.1 Gene:PGLYRP1 / 8993 HGNCID:8904 Length:196 Species:Homo sapiens
Sequence 2:NP_001261970.1 Gene:PGRP-SB2 / 39869 FlyBaseID:FBgn0043577 Length:191 Species:Drosophila melanogaster


Alignment Length:151 Identity:55/151 - (36%)
Similarity:80/151 - (52%) Gaps:13/151 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    33 IVPRNEWKAL-ASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYN 96
            ||||:.|..: .|.....|.:|:|.:::.||..:.|..|..||...|.::..||:. .:.|:|||
  Fly    19 IVPRSSWCPVPISPRMPRLMVPVRLIIIHHTVTAPCFNPHQCQLVLRQIRADHMRR-KFRDIGYN 82

Human    97 FLIGEDGLVYEGRGWNFTGAHSGHLWNPMSIGISFMGNYMDR--VPTPQAIRAAQGLLACGVAQ- 158
            ||||.||.:|||.|:...|.|:.. :|..||||:|:||:.:.  .|.|...|.|   .:.|.|| 
  Fly    83 FLIGGDGRIYEGLGFGIRGEHAPR-YNSQSIGIAFIGNFQNAPGCPNPHPNRCA---ASPGFAQL 143

Human   159 ---GAL-RSNYVLKGHRDVQR 175
               |:| ...:.|.|:...||
  Fly   144 FRGGSLPNEGHCLSGNTPSQR 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGLYRP1NP_005082.1 PGRP 31..173 CDD:128941 53/147 (36%)
PGRP-SB2NP_001261970.1 PGRP 18..>129 CDD:128941 43/111 (39%)

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