DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGLYRP1 and PGRP-LC

DIOPT Version :10

Sequence 1:NP_005082.1 Gene:PGLYRP1 / 8993 HGNCID:8904 Length:196 Species:Homo sapiens
Sequence 2:NP_648298.1 Gene:PGRP-LC / 39063 FlyBaseID:FBgn0035976 Length:520 Species:Drosophila melanogaster


Alignment Length:164 Identity:50/164 - (30%)
Similarity:84/164 - (51%) Gaps:4/164 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    34 VPRNEWKALASEC-AQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNF 97
            |.|.:|.|...:. ...|.||:..|:...|...:|:|.|.|..:.|.:|.|.:::...||:.|||
  Fly   356 VERQQWLAQPPQKEIPDLELPVGLVIALPTNSENCSTQAICVLRVRLLQTYDIESSQKCDIAYNF 420

Human    98 LIGEDGLVYEGRGWNFTGAHSGHL-WNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGAL 161
            |||.||.||.|||||..|||..:: ::..|:..:::|::....|:.:.:...:.||..||..|.:
  Fly   421 LIGGDGNVYVGRGWNKMGAHMNNINYDSQSLSFAYIGSFKTIQPSAKQLSVTRLLLERGVKLGKI 485

Human   162 RSNYVLKGHRDVQRTLS--PGNQLYHLIQNWPHY 193
            ..:|.......:..:::  ..:.||....||.|:
  Fly   486 APSYRFTASSKLMPSVTDFKADALYASFANWTHW 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGLYRP1NP_005082.1 PGRP 31..173 CDD:128941 45/140 (32%)
PGRP-LCNP_648298.1 PGRP 356..490 CDD:128941 44/133 (33%)

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