DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SELENBP1 and CG7966

DIOPT Version :9

Sequence 1:NP_001245218.1 Gene:SELENBP1 / 8991 HGNCID:10719 Length:514 Species:Homo sapiens
Sequence 2:NP_650256.2 Gene:CG7966 / 41610 FlyBaseID:FBgn0038115 Length:486 Species:Drosophila melanogaster


Alignment Length:485 Identity:252/485 - (51%)
Similarity:335/485 - (69%) Gaps:16/485 - (3%)


- Green bases have known domain annotations that are detailed below.


Human    42 STATKCGNCGPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRL 105
            |..|.|.  ||||:|||:||: ||||:::|...:..|......|||:||||||:||.|||::||.
  Fly     2 SNKTCCR--GPGYATPLDAMRSGPREKLLYTVTVQPNLDEPHGDYLSTVDVDPESPTYCQIVHRT 64

Human   106 PMPNLKDELHHSGWNTCSSCF--GDSTKS---RTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIE 165
            ......|||||||||.||||:  .:|:|:   |.:||||||.|..||::||.::||.|::.|.|:
  Fly    65 FTNRKGDELHHSGWNACSSCYYVDESSKTVPKRDRLVLPSLNSDFIYILDVVTDPRKPEIVKTID 129

Human   166 PKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGY 230
             .|:.....:...||:||||:|.:|||.:||.:|..||.|:|.|.: |...|||.:....|..||
  Fly   130 -GDVLKSHNVTAPHTTHCLANGNIMISVMGDAEGYAKGDFILFDSD-FNCIGTWTKGDKKALCGY 192

Human   231 DFWYQPRHNVMISTEWAAPNVLRDGFNPADVE-AGLYGSHLYVWDWQRHEIVQTLSL-KDGLIPL 293
            ||||||..:||:|:||.|||..|.|:...|:| ...||..|..:.|....:.||:.| .||:.||
  Fly   193 DFWYQPYFDVMVSSEWGAPNKWRRGWKNVDLEDMSQYGCRLNFYKWSTQTLYQTIDLGSDGITPL 257

Human   294 EIRFLHNPDAAQGFVGCALSSTIQRF-YKNEGGTWSVEKVIQVPPKKVK--GWLLPEMPGLITDI 355
            ||||||||..|:|||||||::.:..| .|::...:..:|||.:|.|.|.  ..:..:|.|:|:||
  Fly   258 EIRFLHNPKKAEGFVGCALNAKVFHFKKKSDSDEFEAKKVIDIPGKLVDTGSGVAEDMGGMISDI 322

Human   356 LLSLDDRFLYFSNWLHGDLRQYDISDPQRPRLTGQLFLGGSIVKGGP-VQVLEDEELKSQPEPLV 419
            ::||||||||.:.|.|||:|||||:||:.|:|||||||||:|....| |.|.||:|||.:|....
  Fly   323 IISLDDRFLYVNCWRHGDVRQYDITDPENPKLTGQLFLGGAICSDLPNVIVKEDKELKERPPARY 387

Human   420 VKGKRVAGGPQMIQLSLDGKRLYITTSLYSAWDKQFYPDLIREGSVMLQVDVDTVKGGLKLNPNF 484
            |||:|:.|||||:||||||||||:::||||.|||||||.::.:|..::.:|||||.||:.||.:|
  Fly   388 VKGRRLEGGPQMLQLSLDGKRLYVSSSLYSPWDKQFYPKMVSQGGHIVLIDVDTVNGGISLNEDF 452

Human   485 LVDFGKEPLGPALAHELRYPGGDCSSDIWI 514
            ||||..||.||:|.||:|||||||:||||:
  Fly   453 LVDFANEPYGPSLPHEMRYPGGDCTSDIWL 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SELENBP1NP_001245218.1 SBP56 49..514 CDD:283374 248/476 (52%)
CG7966NP_650256.2 SBP56 6..482 CDD:283374 249/479 (52%)
LVIVD repeat 321..358 CDD:293789 25/36 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153123
Domainoid 1 1.000 496 1.000 Domainoid score I358
eggNOG 1 0.900 - - E1_KOG0918
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2930
Inparanoid 1 1.050 497 1.000 Inparanoid score I1393
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61143
OrthoDB 1 1.010 - - D227621at33208
OrthoFinder 1 1.000 - - FOG0003227
OrthoInspector 1 1.000 - - oto88557
orthoMCL 1 0.900 - - OOG6_104861
Panther 1 1.100 - - LDO PTHR23300
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5418
SonicParanoid 1 1.000 - - X2649
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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