DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRPA1 and pyx

DIOPT Version :9

Sequence 1:XP_011515926.1 Gene:TRPA1 / 8989 HGNCID:497 Length:1144 Species:Homo sapiens
Sequence 2:NP_612015.1 Gene:pyx / 38037 FlyBaseID:FBgn0035113 Length:956 Species:Drosophila melanogaster


Alignment Length:1107 Identity:236/1107 - (21%)
Similarity:402/1107 - (36%) Gaps:317/1107 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   102 ELMEKITRDSSLEVLHEMDDYGNTPLHCAVEKNQIESVKF-----LLSRGANPNLRNFNMMAPLH 161
            |..|...|....::|.::|:...|.......|:.::.|:.     |::..|:.||      |.:.
  Fly    47 EAHEIFARQQQNQILWDLDEVKETLTESPGGKHVVDMVQSGCFLELMTDSADCNL------ALIC 105

Human   162 IAVQGMNNEVMKVLLEHRTIDVNLEGENGNTAVIIACTTNNSEALQILLKKGAKPCKSNKWGC-- 224
            .:|.|.....: .||:|...|.|:....|.|.:..||...|:...::||..||.|   |:|..  
  Fly   106 CSVFGSVENTL-FLLKHYNADPNVADSRGRTPLHFACCRANAPIAKVLLDFGADP---NRWDARK 166

Human   225 --FPIHQAAFSGSKECMEIILRFGEEHGYSRQLHINFMNNGKATPLHLAVQNGDLEMIKMCLDNG 287
              ..:|.||.|.|.||:.::||        |:..|| :...|.:.||.|:....::.:::.|..|
  Fly   167 EVTSLHCAASSKSVECILLLLR--------RKASIN-IGIEKRSALHYAIDVNAVDCVEILLKYG 222

Human   288 AQIDPVEKGRCTAIHFAATQGATEIVKLMISSYSGSVDIVNTTDGCHETMLHRASLFDHHELADY 352
            |  ||                                   ||.....||.||.||.....:....
  Fly   223 A--DP-----------------------------------NTPQVYTETPLHTASAAGFAKCVQL 250

Human   353 LISVGADINKIDSEGR-SPLILATASASWNIVNLLLSKGAQVDIKDNFGRNFLHLTVQQPYGLKN 416
            |:|..||:.....||: :.|.||..:.......|||...|:||.     ||..|.          
  Fly   251 LLSHNADVRSQFGEGKVTALHLAAENDYVECARLLLEHRAEVDC-----RNASHQ---------- 300

Human   417 LRPEFMQMQQIKELVMDEDNDGCTPLHYACRQGGPGSVNNLLGFNVSIHSKSKDKKSPLHFA-AS 480
                                   ||||.||.....|:|:.|:.:..::::..:|.::.||.| ..
  Fly   301 -----------------------TPLHLACLSQSIGTVDLLISYGANVNAVYRDGRTALHAAIVK 342

Human   481 YGR-INTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALH 544
            ..| ::.|..||:..:|   :|:.|.:|.||||:||.|.....|...::.||             
  Fly   343 QSRSLDCCNALLKAGAD---VNKADNYGYTPLHIAALNEFSSCVYTFIEHGA------------- 391

Human   545 HASMGGYTQTMKVILDTNLKCTDRLDEDGNTALHFAAREGHAKAVALLLSHNADIVLNKQQASFL 609
                               ..|.|.|             |...|::.::....:|:         
  Fly   392 -------------------DITARTD-------------GRVSALSFIVRRTPEII--------- 415

Human   610 HLALHNKRKEVVLTIIRSKRWDECLKIFSHNSPGNKCPITEMIEYLPECMKVLLDFCMLHSTE-- 672
                                                          |:.|:.|......:..|  
  Fly   416 ----------------------------------------------PKLMQKLDSSIKANDQEIG 434

Human   673 DKSCRDYYIEYNFKYLQCPLEFTKKTPTQDVIYEPLTALNAMVQNNRIELLNHPVCKEYLLMKWL 737
            |..|            |..|:|....|:..:.......|.::::..:..:|.||:|:.:|.:||.
  Fly   435 DVDC------------QIKLDFRLLVPSSSMDRGETELLLSLIEVGQKRILMHPLCETFLFLKWR 487

Human   738 AYGFRAHMMNLGSYCLGLIPMTILVV------------NIKPGMAFNSTGIINETSDHSEILDTT 790
            ... :..:|:|..:.|.:|..|..|:            .:.||                      
  Fly   488 RIR-KFFLMSLAYHTLFVILFTFYVIWVYVRCCKKEELCVAPG---------------------- 529

Human   791 NSYLIKTCMILVFLSSIFGYCKEAGQIFQQKRNYFMDISNVLEWIIYTTGIIFVLPLFV---EIP 852
               .:.|...||.:.::....||..|:....|.|.....|.|:|.|.|..::.|.|..|   ::.
  Fly   530 ---YVSTIGYLVIILNLILLGKEVFQMAHGLRGYAKYWENWLQWTIGTGVLLCVTPETVRTDDLT 591

Human   853 AHLQWQ--CGAIAVYFYWMNFLLYLQRFENCGIFIVMLEVILKTLLRSTVVFIFLLLAFGLSFYI 915
            |...||  ..||.:...|:..::.:.||...|:::.|...:.....:..:.:|.||:||||||.:
  Fly   592 AVPVWQHHVAAIVILLVWLELMMLVGRFPIFGVYVQMFTKVAVNFAKFLLAYICLLVAFGLSFAV 656

Human   916 LLNLQDPFSSPLLSIIQTFSMMLGDINYRESFLEPYLRNELAHPVLSFAQLVSFTIFVPIVLMNL 980
            |.|....|.:...|.:::.:||.|::.:.:.|...|   .:..||.:....:||.:.|.::|.||
  Fly   657 LFNDYPAFENITWSFLKSITMMSGELEFEDIFYGDY---AVKFPVTAHIIFLSFVLLVTVILTNL 718

Human   981 LIGLAVGDIAEVQKHASLKRIAMQVELHTSLEKKLPLWFLRKV---------------------D 1024
            ::||||.||..:|..|:|.|:..|.||.:.||.   |:|.|.:                     |
  Fly   719 MVGLAVSDIQGLQVSATLDRLVRQAELVSRLES---LFFSRLLRSAPTNLIQLCKRSALLRTSRD 780

Human  1025 QKSTIVYPNKPRSGGMLFHIFCFLFCTGEIRQEIPNADKSLEMEILKQKYRLKDLTFLLEKQHEL 1089
            :....:.||.||...:...|...::   ::..|..:.::||.....:..|.:  .:..|::|.:.
  Fly   781 KLQFTIRPNDPRDNQLPEDIKLNVY---KLVAERRDRNQSLRRRQFENNYNI--FSRSLQRQQQP 840

Human  1090 IKLIIQKMEIISETEDDD--------------SHCSFQDRFKKE-----QMEQRNSRWNTVLRAV 1135
            :.....|.|..:.|....              |..:...:|::|     ||:.:.:..:.||..|
  Fly   841 LHTDFLKPEPATGTTKKTPQNLFHMHELLRPRSATNVPQQFRQEAEGTVQMKNQANVLSAVLAEV 905

Human  1136 KA 1137
            :|
  Fly   906 QA 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRPA1XP_011515926.1 Ank_4 91..143 CDD:290365 8/45 (18%)
ANK repeat 92..120 CDD:293786 4/17 (24%)
ANK 120..243 CDD:238125 35/131 (27%)
ANK repeat 122..153 CDD:293786 7/35 (20%)
Ank_2 127..220 CDD:289560 24/97 (25%)
ANK repeat 155..187 CDD:293786 8/31 (26%)
ANK repeat 189..214 CDD:293786 7/24 (29%)
ANK repeat 222..261 CDD:293786 13/42 (31%)
Ank_4 226..282 CDD:290365 16/55 (29%)
ANK 258..387 CDD:238125 28/129 (22%)
ANK repeat 266..294 CDD:293786 8/27 (30%)
Ank_2 268..364 CDD:289560 20/95 (21%)
ANK repeat 296..364 CDD:293786 12/67 (18%)
ANK 361..527 CDD:238125 43/168 (26%)
ANK repeat 366..397 CDD:293786 11/31 (35%)
ANK repeat 437..468 CDD:293786 9/30 (30%)
Ank_2 442..531 CDD:289560 27/90 (30%)
ANK repeat 470..504 CDD:293786 10/35 (29%)
ANK 501..625 CDD:238125 19/123 (15%)
ANK repeat 506..536 CDD:293786 11/29 (38%)
Ank_2 511..602 CDD:289560 14/90 (16%)
ANK repeat 538..570 CDD:293786 2/31 (6%)
ANK repeat 572..597 CDD:293786 2/24 (8%)
Ion_trans 769..997 CDD:278921 59/232 (25%)
pyxNP_612015.1 Ank_4 99..153 CDD:290365 15/60 (25%)
ANK repeat 102..130 CDD:293786 8/28 (29%)
ANK 127..252 CDD:238125 42/173 (24%)
ANK repeat 132..163 CDD:293786 11/33 (33%)
Ank_2 137..226 CDD:289560 31/137 (23%)
ANK repeat 166..196 CDD:293786 12/38 (32%)
ANK 198..319 CDD:238125 43/195 (22%)
ANK repeat 200..229 CDD:293786 10/65 (15%)
Ank_2 203..296 CDD:289560 31/134 (23%)
ANK repeat 231..262 CDD:293786 10/30 (33%)
ANK 268..387 CDD:238125 41/159 (26%)
ANK repeat 268..296 CDD:293786 9/32 (28%)
Ank_2 270..364 CDD:289560 31/134 (23%)
ANK repeat 298..329 CDD:293786 10/63 (16%)
ANK repeat 331..364 CDD:293786 10/35 (29%)
Ank_5 353..404 CDD:290568 20/98 (20%)
ANK repeat 366..396 CDD:293786 12/61 (20%)
Ion_trans 556..734 CDD:278921 53/180 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D180347at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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