DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRPA1 and pyx

DIOPT Version :10

Sequence 1:XP_011515926.1 Gene:TRPA1 / 8989 HGNCID:497 Length:1144 Species:Homo sapiens
Sequence 2:NP_612015.1 Gene:pyx / 38037 FlyBaseID:FBgn0035113 Length:956 Species:Drosophila melanogaster


Alignment Length:1107 Identity:236/1107 - (21%)
Similarity:402/1107 - (36%) Gaps:317/1107 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   102 ELMEKITRDSSLEVLHEMDDYGNTPLHCAVEKNQIESVKF-----LLSRGANPNLRNFNMMAPLH 161
            |..|...|....::|.::|:...|.......|:.::.|:.     |::..|:.||      |.:.
  Fly    47 EAHEIFARQQQNQILWDLDEVKETLTESPGGKHVVDMVQSGCFLELMTDSADCNL------ALIC 105

Human   162 IAVQGMNNEVMKVLLEHRTIDVNLEGENGNTAVIIACTTNNSEALQILLKKGAKPCKSNKWGC-- 224
            .:|.|.....: .||:|...|.|:....|.|.:..||...|:...::||..||.|   |:|..  
  Fly   106 CSVFGSVENTL-FLLKHYNADPNVADSRGRTPLHFACCRANAPIAKVLLDFGADP---NRWDARK 166

Human   225 --FPIHQAAFSGSKECMEIILRFGEEHGYSRQLHINFMNNGKATPLHLAVQNGDLEMIKMCLDNG 287
              ..:|.||.|.|.||:.::||        |:..|| :...|.:.||.|:....::.:::.|..|
  Fly   167 EVTSLHCAASSKSVECILLLLR--------RKASIN-IGIEKRSALHYAIDVNAVDCVEILLKYG 222

Human   288 AQIDPVEKGRCTAIHFAATQGATEIVKLMISSYSGSVDIVNTTDGCHETMLHRASLFDHHELADY 352
            |  ||                                   ||.....||.||.||.....:....
  Fly   223 A--DP-----------------------------------NTPQVYTETPLHTASAAGFAKCVQL 250

Human   353 LISVGADINKIDSEGR-SPLILATASASWNIVNLLLSKGAQVDIKDNFGRNFLHLTVQQPYGLKN 416
            |:|..||:.....||: :.|.||..:.......|||...|:||.     ||..|.          
  Fly   251 LLSHNADVRSQFGEGKVTALHLAAENDYVECARLLLEHRAEVDC-----RNASHQ---------- 300

Human   417 LRPEFMQMQQIKELVMDEDNDGCTPLHYACRQGGPGSVNNLLGFNVSIHSKSKDKKSPLHFA-AS 480
                                   ||||.||.....|:|:.|:.:..::::..:|.::.||.| ..
  Fly   301 -----------------------TPLHLACLSQSIGTVDLLISYGANVNAVYRDGRTALHAAIVK 342

Human   481 YGR-INTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALH 544
            ..| ::.|..||:..:|   :|:.|.:|.||||:||.|.....|...::.||             
  Fly   343 QSRSLDCCNALLKAGAD---VNKADNYGYTPLHIAALNEFSSCVYTFIEHGA------------- 391

Human   545 HASMGGYTQTMKVILDTNLKCTDRLDEDGNTALHFAAREGHAKAVALLLSHNADIVLNKQQASFL 609
                               ..|.|.|             |...|::.::....:|:         
  Fly   392 -------------------DITARTD-------------GRVSALSFIVRRTPEII--------- 415

Human   610 HLALHNKRKEVVLTIIRSKRWDECLKIFSHNSPGNKCPITEMIEYLPECMKVLLDFCMLHSTE-- 672
                                                          |:.|:.|......:..|  
  Fly   416 ----------------------------------------------PKLMQKLDSSIKANDQEIG 434

Human   673 DKSCRDYYIEYNFKYLQCPLEFTKKTPTQDVIYEPLTALNAMVQNNRIELLNHPVCKEYLLMKWL 737
            |..|            |..|:|....|:..:.......|.::::..:..:|.||:|:.:|.:||.
  Fly   435 DVDC------------QIKLDFRLLVPSSSMDRGETELLLSLIEVGQKRILMHPLCETFLFLKWR 487

Human   738 AYGFRAHMMNLGSYCLGLIPMTILVV------------NIKPGMAFNSTGIINETSDHSEILDTT 790
            ... :..:|:|..:.|.:|..|..|:            .:.||                      
  Fly   488 RIR-KFFLMSLAYHTLFVILFTFYVIWVYVRCCKKEELCVAPG---------------------- 529

Human   791 NSYLIKTCMILVFLSSIFGYCKEAGQIFQQKRNYFMDISNVLEWIIYTTGIIFVLPLFV---EIP 852
               .:.|...||.:.::....||..|:....|.|.....|.|:|.|.|..::.|.|..|   ::.
  Fly   530 ---YVSTIGYLVIILNLILLGKEVFQMAHGLRGYAKYWENWLQWTIGTGVLLCVTPETVRTDDLT 591

Human   853 AHLQWQ--CGAIAVYFYWMNFLLYLQRFENCGIFIVMLEVILKTLLRSTVVFIFLLLAFGLSFYI 915
            |...||  ..||.:...|:..::.:.||...|:::.|...:.....:..:.:|.||:||||||.:
  Fly   592 AVPVWQHHVAAIVILLVWLELMMLVGRFPIFGVYVQMFTKVAVNFAKFLLAYICLLVAFGLSFAV 656

Human   916 LLNLQDPFSSPLLSIIQTFSMMLGDINYRESFLEPYLRNELAHPVLSFAQLVSFTIFVPIVLMNL 980
            |.|....|.:...|.:::.:||.|::.:.:.|...|   .:..||.:....:||.:.|.::|.||
  Fly   657 LFNDYPAFENITWSFLKSITMMSGELEFEDIFYGDY---AVKFPVTAHIIFLSFVLLVTVILTNL 718

Human   981 LIGLAVGDIAEVQKHASLKRIAMQVELHTSLEKKLPLWFLRKV---------------------D 1024
            ::||||.||..:|..|:|.|:..|.||.:.||.   |:|.|.:                     |
  Fly   719 MVGLAVSDIQGLQVSATLDRLVRQAELVSRLES---LFFSRLLRSAPTNLIQLCKRSALLRTSRD 780

Human  1025 QKSTIVYPNKPRSGGMLFHIFCFLFCTGEIRQEIPNADKSLEMEILKQKYRLKDLTFLLEKQHEL 1089
            :....:.||.||...:...|...::   ::..|..:.::||.....:..|.:  .:..|::|.:.
  Fly   781 KLQFTIRPNDPRDNQLPEDIKLNVY---KLVAERRDRNQSLRRRQFENNYNI--FSRSLQRQQQP 840

Human  1090 IKLIIQKMEIISETEDDD--------------SHCSFQDRFKKE-----QMEQRNSRWNTVLRAV 1135
            :.....|.|..:.|....              |..:...:|::|     ||:.:.:..:.||..|
  Fly   841 LHTDFLKPEPATGTTKKTPQNLFHMHELLRPRSATNVPQQFRQEAEGTVQMKNQANVLSAVLAEV 905

Human  1136 KA 1137
            :|
  Fly   906 QA 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRPA1XP_011515926.1 ANKYR 72..371 CDD:440430 67/278 (24%)
ANK repeat 92..120 CDD:293786 4/17 (24%)
ANK repeat 122..153 CDD:293786 7/35 (20%)
ANK repeat 155..187 CDD:293786 8/31 (26%)
ANK repeat 189..214 CDD:293786 7/24 (29%)
ANK repeat 222..261 CDD:293786 13/42 (31%)
ANKYR 254..544 CDD:440430 68/292 (23%)
ANK repeat 266..294 CDD:293786 8/27 (30%)
ANK repeat 296..364 CDD:293786 12/67 (18%)
ANK repeat 366..397 CDD:293786 11/31 (35%)
ANK repeat 437..468 CDD:293786 9/30 (30%)
ANK repeat 470..504 CDD:293786 10/35 (29%)
ANK repeat 506..536 CDD:293786 11/29 (38%)
Ank_2 511..602 CDD:463710 14/90 (16%)
ANK repeat 538..570 CDD:293786 2/31 (6%)
ANK repeat 572..597 CDD:293786 2/24 (8%)
Ion_trans <821..997 CDD:459842 53/180 (29%)
pyxNP_612015.1 Ank_2 88..161 CDD:463710 22/82 (27%)
ANK repeat 102..130 CDD:293786 8/28 (29%)
ANK repeat 132..163 CDD:293786 11/33 (33%)
ANKYR 148..435 CDD:440430 95/476 (20%)
ANK repeat 166..196 CDD:293786 12/38 (32%)
ANK repeat 200..229 CDD:293786 10/65 (15%)
ANK repeat 231..262 CDD:293786 10/30 (33%)
ANK repeat 268..296 CDD:293786 9/32 (28%)
ANK repeat 298..329 CDD:293786 10/63 (16%)
ANK repeat 331..364 CDD:293786 10/35 (29%)
ANK repeat 366..396 CDD:293786 12/61 (20%)
Ion_trans <562..734 CDD:459842 51/174 (29%)

Return to query results.
Submit another query.