Sequence 1: | NP_443729.1 | Gene: | SIGLEC12 / 89858 | HGNCID: | 15482 | Length: | 595 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001024651.1 | Gene: | wrk-1 / 181093 | WormBaseID: | WBGene00006942 | Length: | 452 | Species: | Caenorhabditis elegans |
Alignment Length: | 245 | Identity: | 51/245 - (20%) |
---|---|---|---|
Similarity: | 81/245 - (33%) | Gaps: | 53/245 - (21%) |
- Green bases have known domain annotations that are detailed below.
Human 379 ASTTLR---NGSALSVLEGQSLHLVCAVDSNPPARLSW---------------TWGSLTLSPSQS 425
Human 426 SNLGVLELPRVHVKDEGEFTCRAQNPLGSQHISLSLSLQNEYTGKMRPI------SGVTLGAFGG 484
Human 485 AGATALVFLYFCIIFVVVRSCRKKSARPAVGVGDTGM-----EDANAVRGSASQGPLIESPADDS 544
Human 545 PPHHAPPALATPSPEEGEIQYASLSFHKARPQYPQEQEAIGYEYSEINIP 594 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SIGLEC12 | NP_443729.1 | Ig | 24..142 | CDD:325142 | |
Ig | 151..269 | CDD:325142 | |||
Ig | 232..345 | CDD:325142 | |||
IG_like | 389..462 | CDD:214653 | 21/87 (24%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 512..560 | 11/52 (21%) | |||
ITIM motif | 563..568 | 1/4 (25%) | |||
SLAM-like motif | 586..591 | 0/4 (0%) | |||
wrk-1 | NP_001024651.1 | IG_like | 25..113 | CDD:214653 | 21/90 (23%) |
IGc2 | 31..96 | CDD:197706 | 17/67 (25%) | ||
IG_like | 132..212 | CDD:214653 | 19/100 (19%) | ||
IGc2 | 142..202 | CDD:197706 | 14/79 (18%) | ||
IG_like | 235..320 | CDD:214653 | 51/245 (21%) | ||
Ig | 245..318 | CDD:143165 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X34 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |