DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PLOD3 and Plod

DIOPT Version :10

Sequence 1:NP_001075.1 Gene:PLOD3 / 8985 HGNCID:9083 Length:738 Species:Homo sapiens
Sequence 2:NP_648451.1 Gene:Plod / 39265 FlyBaseID:FBgn0036147 Length:721 Species:Drosophila melanogaster


Alignment Length:733 Identity:332/733 - (45%)
Similarity:475/733 - (64%) Gaps:26/733 - (3%)


- Green bases have known domain annotations that are detailed below.


Human    13 LLPLLLPPAASASDRPRGRDPVNPEKLLVITVATAETEGYLRFLRSAEFFNYTVRTLGLGEEWRG 77
            ||.|||...:.........|     |:.|.||||..|:||.|::|||..::..|.||||||||:|
  Fly     8 LLLLLLAVTSQGDAESNWND-----KIKVFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWKG 67

Human    78 GDVARTVGGGQKVRWLKKEMEKYADREDMIIMFVDSYDVILAGSPTELLKKFVQSGSRLLFSAES 142
            ||:.:. |||.|:..|::.:..|.:..:.||:|.||||||:..:..|:.:||.:||:::|||||.
  Fly    68 GDMQKP-GGGFKLNLLREAIAPYKNEPETIILFTDSYDVIITTTLDEIFEKFKESGAKILFSAEK 131

Human   143 FCWPEWGLAEQYPEV-GTGKRFLNSGGFIGFATTIHQIVRQWKYKDDDDDQLFYTRLYLDPGLRE 206
            :|||:..||..|||| |...||||||.|||:|..:..::.. ..:|..||||::|:::||...|.
  Fly   132 YCWPDKSLANDYPEVEGKASRFLNSGAFIGYAPQVFALLVD-PIEDTADDQLYFTKIFLDETKRA 195

Human   207 KLSLNLDHKSRIFQNLNGALDEVVLKFD--RNRVRIRNVAYDTLPIVVHGNGPTKLQLNYLGNYV 269
            ||.|.||.:||:||||:||.::|.||.|  .|:..::||.:.|.|.::||||.:|:.||..|||:
  Fly   196 KLGLKLDVQSRLFQNLHGAKNDVKLKVDLESNQGVLQNVDFMTTPSIIHGNGLSKVDLNAYGNYL 260

Human   270 PNGWTPEGGCGFCNQDRRTLPGGQPPPRVFLAVFVEQPTPFLPRFLQRLLLLDYPPDRVTLFLHN 334
            ..  |..|.|..|.::...|.....|. :.||:.|.||.||..:||:.:..|:||.:::.|.:::
  Fly   261 AR--TFNGVCLLCQENLLDLEETNLPV-ISLALMVTQPVPFFDQFLEGIESLNYPKEKLHLLIYS 322

Human   335 NEVFHEPHIADSWPQLQDHFSAVKLVGPEEALSPGEARDMAMDLCRQDPECEFYFSLDADAVLTN 399
            |..||:..|.....:....::..|.....:.|...:.|.:|:|..|.. :.::.|.:||||.:.:
  Fly   323 NVAFHDDDIKSFVNKHAKEYATAKFALSTDELDERQGRQLALDKARLH-QSDYIFFVDADAHIDD 386

Human   400 LQTLRILIEENRKVIAPMLSRHGKLWSNFWGALSPDEYYARSEDYVELVQRKRVGVWNVPYISQA 464
            .:.||.|:..|::.:||:.|:|.:||||||||||...|||||.|||::|:|:.:|::|||:::..
  Fly   387 GEVLRELLRLNKQFVAPIFSKHKELWSNFWGALSEGGYYARSHDYVDIVKRELIGMFNVPHVTSI 451

Human   465 YVIRG---DTLRMELPQRDVFSGSDTDPDMAFCKSFRDKGIFLHLSNQHEFGRLLATSRYDTEHL 526
            |:::.   |.:.        |...:.|||||.|:|.|:.|||::.||...||.|:....::|...
  Fly   452 YLVKKTAFDAIS--------FKHKEFDPDMAMCESLRNAGIFMYASNLRIFGHLVNADDFNTTVT 508

Human   527 HPDLWQIFDNPVDWKEQYIHENYSRALEGEGIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQWS 591
            .||.:.:|.|.:||.|:|||.|||..|.....::|||||||||.::|:..||:|||.||.:..||
  Fly   509 RPDFYTLFSNEIDWTEKYIHPNYSLQLNESNKIQQPCPDVYWFQIVSDAFCDDLVAIMEAHNGWS 573

Human   592 GGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTESLFPGY-HTKARAVMNFVVR 655
            .|.:.|:||.||||.|||.||||||||.|..:|:.|:.:|.|:.|..|.|| |...||:|||:||
  Fly   574 DGSNNDNRLEGGYEAVPTRDIHMKQVGLERLYLKFLQMFVRPLQERAFTGYFHNPPRALMNFMVR 638

Human   656 YRPDEQPSLRPHHDSSTFTLNVALNHKGLDYEGGGCRFLRYDCVISSPRKGWALLHPGRLTHYHE 720
            |||||||||||||||||:|:|:|:|..|:||:||||||:||:|.::..:|||.|:||||||||||
  Fly   639 YRPDEQPSLRPHHDSSTYTINIAMNRAGIDYQGGGCRFIRYNCSVTDTKKGWMLMHPGRLTHYHE 703

Human   721 GLPTTWGTRYIMVSFVDP 738
            ||..|.||||||:||:||
  Fly   704 GLLVTNGTRYIMISFIDP 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PLOD3NP_001075.1 Required for glycosyltransferase activity. /evidence=ECO:0000269|PubMed:18298658, ECO:0000269|PubMed:30089812 25..290 116/267 (43%)
GT_LH3 37..266 CDD:438558 108/231 (47%)
Accessory region. /evidence=ECO:0000269|PubMed:30089812 295..520 80/227 (35%)
P4Hc 573..736 CDD:214780 103/163 (63%)
Important for dimerization. /evidence=ECO:0000269|PubMed:30089812 672..715 24/42 (57%)
PlodNP_648451.1 GT_LH 27..257 CDD:459235 109/236 (46%)
Glyco_tranf_GTA_type 303..>395 CDD:472172 23/92 (25%)
P4Hc 555..719 CDD:214780 103/163 (63%)

Return to query results.
Submit another query.