DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATG16L2 and Atg16l2

DIOPT Version :10

Sequence 1:NP_203746.1 Gene:ATG16L2 / 89849 HGNCID:25464 Length:619 Species:Homo sapiens
Sequence 2:XP_006508294.1 Gene:Atg16l2 / 73683 MGIID:1920933 Length:658 Species:Mus musculus


Alignment Length:563 Identity:464/563 - (82%)
Similarity:497/563 - (88%) Gaps:10/563 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAGPGV---PGAPAARWKRHIVRQLRLRDRTQKALFLELVPAYNHLLEKAELLDKFSKKLQPEPN 62
            |||||.   |.||||.||||||||||.||||||||||||||||||||||||||.|||:||:.||.
Mouse    25 MAGPGAPCDPCAPAAVWKRHIVRQLRHRDRTQKALFLELVPAYNHLLEKAELLAKFSEKLKSEPK 89

Human    63 SVTPTTHQGPWEE--SELDSDQVPSLVALRVKWQEEEEGLRLVCGEMAYQVVEKGAALGTLESEL 125
            ....|.|: .|.|  |....|||.|..:||||||:|::||:|||||||||||:|.|||.||:|:|
Mouse    90 DAISTRHE-DWREEVSGTGPDQVSSPASLRVKWQQEKKGLQLVCGEMAYQVVKKSAALDTLQSQL 153

Human   126 QQRQSRLAALEARVAQLREARAQQAQQVEEWRAQNAVQRAAYEALRAHVGLREAALRRLQEEARD 190
            ::||.||.||:|.|.||:||||||::|:||.:|:||.||.|||.|......:|||||||||||||
Mouse   154 EERQDRLEALQACVVQLQEARAQQSRQLEERQAENAAQREAYETLLQQAVHQEAALRRLQEEARD 218

Human   191 LLERLVQRKARAAAERNLRNERRERAKQARVSQELKKAAKRTVSISEGPDTLGDGMRERRETLAL 255
            |||:||||||||||||||||||||||.||.|||||||||||||||||.|:||.||.:|  ||:||
Mouse   219 LLEQLVQRKARAAAERNLRNERRERANQALVSQELKKAAKRTVSISEIPNTLEDGTKE--ETVAL 281

Human   256 APE--PEPLEKEACEKWKRPFRSASATSLTLSHCVDVVKGLLDFKKRRGHSIGGAPEQRYQIIPV 318
            ||.  ||..|.|.|||||||||||||||||||.||||||||||||||||||:|||||||||.|||
Mouse   282 APAALPEFSESETCEKWKRPFRSASATSLTLSRCVDVVKGLLDFKKRRGHSVGGAPEQRYQSIPV 346

Human   319 CVAARLPTRAQDVLDAHLSEVNAVRFGPNSSLLATGGADRLIHLWNVVGSRLEANQTLEGAGGSI 383
            ||:|::|::|||||||||||||||.||||||||||||||||||||||||.|||||||||||||||
Mouse   347 CVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSI 411

Human   384 TSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKE 448
            |||||||||.||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Mouse   412 TSVDFDPSGSQVLAATYNQAAQLWKVGETQSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKE 476

Human   449 WDLGRAYCSRTINVLSYCNDVVCGDHIIISGHNDQKIRFWDSRGPHCTQVIPVQGRVTSLSLSHD 513
            |||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||.||:|
Mouse   477 WDLGRAYCSRTINVLSYCNDVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSYD 541

Human   514 QLHLLSCSRDNTLKVIDLRVSNIRQVFRADGFKCGSDWTKAVF 556
            |||||||||||||||||||:||||||||||||||.||||||||
Mouse   542 QLHLLSCSRDNTLKVIDLRISNIRQVFRADGFKCSSDWTKAVF 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATG16L2NP_203746.1 WD40 repeat 505..543 CDD:293791 34/37 (92%)
WD 6. /evidence=ECO:0000255 546..585 10/11 (91%)
WD40 repeat 551..587 CDD:293791 6/6 (100%)
WD 7. /evidence=ECO:0000255 589..619
ATG16 32..203 CDD:462536 114/172 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..78 8/22 (36%)
SMC_N <121..>295 CDD:481474 130/175 (74%)
WD40 331..619 CDD:238121 217/226 (96%)
WD 1. /evidence=ECO:0000255 334..373 36/38 (95%)
WD40 repeat 341..378 CDD:293791 34/36 (94%)
WD 2. /evidence=ECO:0000255 378..417 36/38 (95%)
WD40 repeat 384..420 CDD:293791 33/35 (94%)
WD 3. /evidence=ECO:0000255 420..454 33/33 (100%)
WD40 repeat 425..461 CDD:293791 35/35 (100%)
WD 4. /evidence=ECO:0000255 455..498 41/42 (98%)
WD40 repeat 467..499 CDD:293791 30/31 (97%)
WD 5. /evidence=ECO:0000255 500..539 35/38 (92%)
Atg16l2XP_006508294.1 ATG16 59..231 CDD:462536 114/172 (66%)
WD40 359..>560 CDD:238121 193/200 (97%)
WD40 repeat 369..406 CDD:293791 34/36 (94%)
WD40 repeat 412..448 CDD:293791 33/35 (94%)
WD40 repeat 453..489 CDD:293791 35/35 (100%)
WD40 repeat 495..527 CDD:293791 30/31 (97%)
WD40 repeat 533..571 CDD:293791 34/37 (92%)
Blue background indicates that the domain is not in the aligned region.

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